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MPI-INF D3 Publications

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Your search returned the following 17 documents:

  1. Predicting interactions between T cell receptors and MHC-peptide complexes
    Kirsten Roomp and Francisco S. Domingues
    Molecular Immunology 48 (4): 553-562, 2011
  2. Predicting MHC class I epitopes in large datasets
    Kirsten Roomp, Iris Antes, and Thomas Lengauer
    BMC Bioinformatics 11 (1): 90,1-90,11, 2010
  3. Short Communication: Selection of Thymidine Analogue Resitance Mutational Patterns in Children from a Common HIV Type 1 Subtype G Source
    Martin Däumer, Sabine Awerkiew, Saleto Sierra Aragon, Vladimir Kartashev, Tatjana Poplavskaja, Rolf Klein, Nadine Sichtig, Bernhard Thielen, Thomas Lengauer, Kirsten Roomp, Herbert Pfister, and Rolf Kaiser
    AIDS Research and Human Retroviruses 26 (3): 275-278, 2010
  4. HLA class I allele associations with HCV genetic variants in patients with chronic HCV genotypes 1a or 1b infection
    Christian Markus Lange, Kirsten Roomp, Anette Dragan, Jacob Nattermann, Monika Michalk, Ulrich Spengler, Viola Weich, Thomas Lengauer, Stefan Zeuzem, Thoma Berg, and Christoph Sarrazin
    Journal of Hepatology 53 (6): 1022-1028, 2010
  5. Intensive blood glucose control is safe and effective in diabetic cats using home monitoring and treatment with glargine
    Kirsten Roomp and Jacquie Rand
    Journal of feline medicine and surgery 11 (8): 668-682, 2009
  6. Evolution of Drug Resistance in HIV
    Kirsten Roomp
    In: Bioinformatics - From Genomes to Therapies 3. The Holy Grail: Molecular Function, 2007, 1457-1496
  7. Selective pressures of HLA genotypes and antiviral therapy on human immunodeficiency virus type 1 sequence mutation at a population level
    G. Ahlenstiel, Kirsten Roomp, Martin Däumer, T. Nattermann, M. Vogel, J.K. Rockstroh, Niko Beerenwinkel, R. Kaiser, H.-D. Nischalke, T. Sauerbruch, Thomas Lengauer, and U. Spengler
    Clinical and Vaccine Immunology 14 (10): 1266-1273, 2007

  8. Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV
    Kirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, and Joachim Selbig
    Lecture Notes in Computer Science 4075: 185-194, 2006
  9. Computational methods for the design of effective therapies against drug resistant HIV strains
    Niko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen Rockstroh, Bernd Kupfer, Rolf Kaiser, and Martin Däumer
    Bioinformatics 21 (21): 3943-3950, 2005
  10. ABCA1 regulatory variants influence coronary artery disease independent of effects on plasma lipid levels
    K.Y. Zwarts, Susanne M. Clee, A.H. Zwinderman, J.C. Engert, Roshni Singaraja, O Loubser, E James, Kirsten Roomp, T.J. Hudson, J.W. Jukema, J.J.P. Kastelein, and Michael R. Hayden
    Clinical Genetics 61 (2): 115-125, 2002
  11. Expression and Functional Analyses of Novel Mutations ot ATP-Binding Cassette Transporter-1 in Japanese Patients with High-Density Lipoprotein Deficiency
    Yoshiharu Nishida, Kenichi Hirano, Kosuke Tsukamoto, Makoto Nagano, Chiaki Ikegami, Kirsten Roomp, Mitsuaki Ishihara, Naoki Sakane, Zhongyan Zhang, Ken-ichi Tsujii, Akifumi Matsuyama, Tohru Ohama, Fumihiko Matsuura, Masato Ishigami, Naohiko Sakai, Hisatoyo Hiraoka, Hiroaki Hattori, Cheryl L. Wellington, Yoshihide Yoshida, Susumu Misugi, Michael R. Hayden, Toru Egashira, Shizuya Yamashita, and Yuji Matsuzawa
    Biochemical and Biophysical Research Communications 290 (2): 713-721, 2002
  12. Truncation mutations in ABCA1 suppress normal upregulation of full-length ABCA1 by 9-cis-retinoic acid and 22-R-hydroxycholesterol
    Cheryl L. Wellington, Yu-Zhou Yang, Stephen Zhou, Susanne M. Clee, Bing Tan, Kenichi Hirano, K.Y. Zwarts, Anita Kwok, Allison Gelfer, Michel Marcil, Scott Newman, Kirsten Roomp, Roshni Singaraja, Jennifer A. Collins, Lin-Hua Zhang, Albert K. Groen, Kees Hovingh, Alison Brownlie, Sherrie Tafuri, Jacques Jr Genest, J.J.P. Kastelein, and Michael R. Hayden
    Journal of Lipid Research 43 (11): 1939-1949, 2002
  13. Common genetic variation in ABCA1 is associated with altered lipoprotein levels and a modified risk for coronary artery disease
    Susanne M. Clee, A.H. Zwinderman, J.C. Engert, K.Y. Zwarts, H.O. Molhuizen, Kirsten Roomp, J.W. Jukema, M van Wijland, M van Dam, T.J. Hudson, A Brooks-Wilson, Jacques Jr Genest, J.J.P. Kastelein, and Michael R. Hayden
    Circulation 103 (9): 1198-205, 2001
  14. Age and residual cholesterol efflux affect HDL cholesterol levels and coronary artery disease in ABCA1 heterozygotes
    Susanne M. Clee, J.J.P. Kastelein, M van Dam, Michel Marcil, Kirsten Roomp, K.Y. Zwarts, Jennifer A. Collins, R Roelants, N Tamasawa, T Stulc, T Suda, R Ceska, B Boucher, C Rondeau, C DeSouich, A Brooks-Wilson, H.O. Molhuizen, J Frohlich, Jacques Jr Genest, and Michael R. Hayden
    Journal of Clinical Investigation 106 (10): 1263-70, 2000
  15. Genomic organization of the human tissue inhibitor of metalloproteinases-3 (TIMP3)
    H. Stohr, Kirsten Roomp, U. Felbor, and B. H. Weber
    Genome Research 5 (5): 483-7, 1995
  16. Mutations in ABC1 in Tangier disease and familial high-density lipoprotein
    A Brooks-Wilson, Michel Marcil, Susanne M. Clee, Lin-Hua Zhang, Kirsten Roomp, M van Dam, L Yu, C Brewer, Jennifer A. Collins, H.O. Molhuizen, O Loubser, B.F. Ouelette, K Fichter, K.J. Ashbourne-Excoffon, C.W. Sensen, S Scherer, S Mott, M Denis, D Martindale, J Frohlich, K Morgan, B Koop, S Pimstone, J.J.P. Kastelein, and Michael R. Hayden
    Nature Genetics 22 (4): 336-45, 1999
  17. Mutations in the ABC1 gene in familial HDL deficiency with defective cholesterol efflux
    Michel Marcil, A. Brooks-Wilson, Susanne M. Clee, Kirsten Roomp, Lin-Hua Zhang, L. Yu, Jennifer A. Collins, M. van Dam, H. O. Molhuizen, O. Loubser, B. F. Ouelette, C. W. Sensen, K. Fichter, S. Mott, M. Denis, B. Boucher, S. Pimstone, Jacques Genest, J. J. P. Kastelein, and Michael R. Hayden
    The Lancet 354 (9187): 1341-6, 1999