Your search returned the following 34 documents:

34. Profiling of parkin-binding partners using tandem affinity purification
    Alessandra Zanon, Aleksandar Rakovic, Hagen Blankenburg, Nadezhda T. Doncheva, Christine Schwienbacher, Alice Serafin, Adrian Alexa, Christian X. Weichenberger, Mario Albrecht, Christine Klein, Andrew A. Hicks, Peter P. Pramstaller, Francisco S. Domingues, and Irene Pichler
    PLoS ONE 8 (11): 1-17, 2013
    
33. Computational Biology
    Thomas Lengauer, Mario Albrecht, and Francisco S. Domingues
    In: Encyclopedia of Molecular Cell Biology and Molecular Medicine, 2012, 1-71
    
32. Ketoamide Resistance and Hepatitis C Virus Fitness in Val55 Variants of the NS3 Serine Protease
    Christoph Welsch, Sabine Schweizer, Testsuro Shimakami, Francisco S. Domingues, Seungtaek Kim, Stanley, M. Lemon, and Iris Antes
    Antimicrobial Agents and Chemotherapy 56 (4): 1907-1915, 2012
    
31. Peptidomimetic Escape Mechanisms Arise via Genetic Diversity in the Ligand-Binding Site of the Hepatitis C Virus NS3/4A Serine Protease
    Christoph Welsch, Tetsuro Shimakami, Christoph Hartmann, Yan Yang, Francisco S. Domingues, Thomas Lengauer, Stefan Zeuzem, and Stanley M. Lemon
    Gastroenterology 142 (3): 654-663, 2012
    
30. Topological analysis and interactive visualization of biological networks and protein structures
    Nadezhda T Doncheva, Yassen Assenov, Francisco S. Domingues, and Mario Albrecht
    Nature Protocols 7 (4): 670-685, 2012
    
29. Analyzing and visualizing residue networks of protein structures
    Nadezhda T. Doncheva, Karsten Klein, Francisco S. Domingues, and Mario Albrecht
    Trends in Biochemical Sciences 36 (4): 179-182, 2011
    
28. Predicting interactions between T cell receptors and MHC-peptide complexes
    Kirsten Roomp and Francisco S. Domingues
    Molecular Immunology 48 (4): 553-562, 2011
    
27. Towards optimal alignment of protein structure distance matrices
    Inken Wohlers, Francisco S. Domingues, and Gunnar W. Klau
    Bioinformatics 26 (18): 2273-2280, 2010
    
26. Characterization of resistance to the protease inhibitor boceprevir in hepatitis C virus-infected patients.
    Simone Susser, Christoph Welsch, Yalan Wang, Markus Zettler, Francisco S. Domingues, Ursula Karey, Eric Hughes, Robert Ralston, Xiao Tong, Eva Herrmann, Stefan Zeuzem, and Christoph Sarrazin
    Hepatology 50 (6): 1709-1718, 2009
    
25. Impact of a single amino acid in the variable region 2 of the Old World monkey TRIM5alpha SPRY (B30.2) domain on anti-human immunodeficiency virus type 2 activity
    Ken Kono, Kasia Bozek, Francisco S. Domingues, Tatsuo Shioda, and Emi E. Nakayama
    Virology 388 (1): 160-168, 2009
    
24. Alignment of Non-Covalent Interactions at Protein-Protein Interfaces
    Hongbo Zhu, Ingolf Sommer, Thomas Lengauer, and Francisco S. Domingues
    PLoS ONE 3 (4): e1926 p., 2008
    [PDF: Download: Zhu2008.pdf]
    
23. Local function conservation in sequence and structure space
    Nils Weinhold, Oliver Sander, Francisco S. Domingues, Thomas Lengauer, and Ingolf Sommer
    PLoS Computational Biology 4: e1000105 p., 2008
    [PDF: Download: Weinhold2008.pdf]
    
22. Molecular basis of telaprevir resistance due to V36 and T54 mutations in the NS3-4A protease of HCV
    Christoph Welsch, Francisco S. Domingues, Simone Susser, Iris Antes, Christoph Hartmann, Gabriele Mayr, Andreas Schlicker, Christoph Sarrazin, Mario Albrecht, Stefan Zeuzem, and Thomas Lengauer
    Genome Biology 9 (1): R16 p., 2008
    [PDF: Download: Welsch2008.pdf]
    
21. Sequence variants in IL10, ARPC2, and multiple other loci contribute to ulcerative colitis
    Andre Franke, Tobias Balschun, Tom H. Karlsen, Jurgita Sventoraityte, Susanna Nikolaus, Gabriele Mayr, Francisco S. Domingues, Mario Albrecht, Michael Nothnagel, David Ellinghaus, Christian Sina, Clive M. Onnie, Rinse K. Weersma, Pieter C. F. Stokkers, Cisca Wijmenga, Maria Gazouli, David Strachan, Wendy L. McArdle, Séverine Vermeire, Paul Rutgeers, Philip Rosenstiel, Michael Krawczak, Morten H. Vatn, the IBSEN study group, Christopher G. Mathew, and Stefan Schreiber
    Nature Genetics 40 (11): 1319-1323, 2008
    
20. Structural descriptors of protein-protein binding sites
    Oliver Sander, Francisco S. Domingues, Hongbo Zhu, Thomas Lengauer, and Ingolf Sommer
    In: Proceedings of 6th Asia-Pacific Bioinformatics Conference, Kyoto, Japan, 2008, 79-88
    
19. Structure to function
    James D. Watson, Janet M. Thornton, Michael L. Tress, Gonzalo Lopez, Alfonso Valencia, Oliver Redfern, Christine A. Orengo, Ingolf Sommer, and Francisco S. Domingues
    In: Modern Genome Annotation, 2008, 239-262
    
18. Comparative Analysis of Protein Structure Alignments
    Gabriele Mayr, Francisco S. Domingues, and Peter Lackner
    BMC Structural Biology 7: 1 p., 2007
    [PDF: Download: Mayr.pdf]
    
17. Conformational analysis of alternative protein structures
    Francisco S. Domingues, Jörg Rahnenführer, and Thomas Lengauer
    Bioinformatics 23 (23): 3131-3138, 2007
    
16. Inferring Protein Function from Protein Structure
    Francisco S. Domingues and Thomas Lengauer
    In: Bioinformatics - From Genomes to Therapies 3. The Holy Grail: Molecular Function, 2007, 1211-1252
    
15. Moment invariants as shape recognition technique for comparing protein binding sites
    Ingolf Sommer, Oliver Müller, Francisco S. Domingues, Oliver Sander, Joachim Weickert, and Thomas Lengauer
    Bioinformatics 23 (23): 3139-3146, 2007
    
14. Predicting HIV coreceptor usage on the basis of genetic and clinical covariates
    Tobias Sing, Andrew J. Low, Niko Beerenwinkel, Oliver Sander, Peter K. Cheung, Francisco S. Domingues, Joachim Büch, Martin Däumer, Rolf Kaiser, Thomas Lengauer, and P. Richard Harrigan
    Antiviral Therapy 12 (7): 1097-1106, 2007
    
13. Structural Descriptors of gp120 V3 Loop for the Prediction of HIV-1 Coreceptor Usage
    Oliver Sander, Tobias Sing, Ingolf Sommer, Andrew J. Low, Peter K. Cheung, P. Richard Harrigan, Thomas Lengauer, and Francisco S. Domingues
    PLoS Computational Biology 3 (3): 555-564, 2007
    [PDF: Download: Sander.pdf]
    
12. GOTax: investigating biological processes and biochemical activities along the taxonomic tree
    Andreas Schlicker, Jörg Rahnenführer, Mario Albrecht, Thomas Lengauer, and Francisco S. Domingues
    Genome Biology 8 (3): R33.1-10, 2007
    [PDF: Download: Schlicker2007.pdf]
    
11. A new measure for functional similarity of gene products based on Gene Ontology
    Andreas Schlicker, Francisco S. Domingues, Jörg Rahnenführer, and Thomas Lengauer
    BMC Bioinformatics 7: 1-16, 2006
    [PDF: Download: Schlicker_BMCBioinformatics_2006.pdf]
    
10. NOXclass: prediction of protein-protein interaction types
    Hongbo Zhu, Francisco S. Domingues, Ingolf Sommer, and Thomas Lengauer
    BMC Bioinformatics 7 (27): 1-15, 2006
    
9. Analysis and prediction of protein-protein interaction types
   Hongbo Zhu, Francisco S. Domingues, Ingolf Sommer, and Thomas Lengauer
   In: 4th European Conference on Computational Biology (ECCB05), Madrid, Spain, 2005, 1 p.
   
8. Automated clustering of ensembles of alternative models in protein structure databases
   Francisco S. Domingues, Jörg Rahnenführer, and Thomas Lengauer
   Protein Engineering Design and Selection 17 (6): 537-543, 2004
   
7. Calculating the statistical significance of changes in pathway activity from gene expression data
   Jörg Rahnenführer, Francisco S. Domingues, Jochen Maydt, and Thomas Lengauer
   Statistical Applications in Genetics and Molecular Biology 3 (1): Article 16 p., 2004
   
6. Predicting Protein Structure Classes from Function Predictions
   Ingolf Sommer, Jörg Rahnenführer, Francisco S. Domingues, Ulrik de Lichtenberg, and Thomas Lengauer
   Bioinformatics 20 (5): 770-776, 2004
   
5. Protein Structure Prediction and Databases
   Francisco S. Domingues, Thomas Lengauer, and Ingolf Sommer
   In: Nature Encyclopedia of the Human Genome, 2004, 864-867
   
4. WILMA-automated annotation of protein sequences
   Andreas Prlic, Francisco S. Domingues, Peter Lackner, and Manfred J. Sippl
   Bioinformatics 20 (4): 127-128, 2004
   
3. Identification of mammalian orthologs associates PYPAF5 with distinct functional roles
   Mario Albrecht, Francisco S. Domingues, Stefan Schreiber, and Thomas Lengauer
   FEBS Letters 538 (1-3): 173-177, 2003
   
2. Protein Function from Sequence and Structure Data
   Francisco S. Domingues and Thomas Lengauer
   Applied Bioinformatics 2 (1): 3-12, 2003
   
1. Structural localization of disease-associated sequence variations in the NACHT and LRR domains of PYPAF1 and NOD2
   Mario Albrecht, Francisco S. Domingues, Stefan Schreiber, and Thomas Lengauer
   FEBS Letters 554 (3): 520-528, 2003