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MPI-INF D3 Publications

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Your search returned the following 11 documents:

  1. Profiling of parkin-binding partners using tandem affinity purification
    Alessandra Zanon, Aleksandar Rakovic, Hagen Blankenburg, Nadezhda T. Doncheva, Christine Schwienbacher, Alice Serafin, Adrian Alexa, Christian X. Weichenberger, Mario Albrecht, Christine Klein, Andrew A. Hicks, Peter P. Pramstaller, Francisco S. Domingues, and Irene Pichler
    PLoS ONE 8 (11): 1-17, 2013
  2. Functional characterization of human genes from exon expression and RNA interference results
    Dorothea Emig, Hagen Blankenburg, Fidel Ramírez, and Mario Albrecht
    In: Bioinformatics and Drug Discovery, 2012, 33-53
  3. Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove
    Ágnes Garai, András Zeke, Gergo Gógl, Imre Töro, Ferenc Fördos, Hagen Blankenburg, Tünde Bárkai, János Varga, Anita Alexa, Dorothea Emig, Mario Albrecht, and Attila Reményi
    Science Signaling 5 (245): ra74,1-ra74,14, 2012
  4. PSICQUIC and PSISCORE: accessing and scoring molecular interactions
    Bruno Aranda, Hagen Blankenburg, Samuel Kerrien, Fiona S. Brinkman, Arnaud Ceol, Emilie Chautard, Jose M. Dana, Javier De Las Rivas, Marine Dumousseau, Eugenia Galeota, Anna Gaulton, Johannes Goll, Robert E. W. Hancock, Ruth Isserlin, Rafael C. Jimenez, Jules Kerssemakers, Jyoti Khadake, David J. Lynn, Magali Michaut, Gavin O'Kelly, Keiichiro Ono, Sandra Orchard, Carlos Prieto, Sabry Razick, Olga Rigina, Lukasz Salwinski, Milan Simonovic, Sameer Velankar, Andrew Winter, Guanming Wu, Gary D. Bader, Gianni Cesareni, Ian M. Donaldson, David Eisenberg, Gerard J. Kleywegt, John Overington, Sylvie Ricard-Blum, Mike Tyers, Mario Albrecht, and Henning Hermjakob
    Nature Methods 8 (7): 528-529, 2011
  5. Recruitment and activation of a lipid kinase by hepatitis C virus NS5A is essential for integrity of the membranous replication compartment
    Simon Reiss, Ilka Rebhan, Perdita Backes, Ines Romero-Brey, Holger Erfle, Petr Matula, Lars Kaderali, Marion Poenisch, Hagen Blankenburg, Marie-Sophie Hiet, Thomas Longerich, Sarah Diehl, Fidel Ramírez, Tamas Balla, Karl Rohr, Artur Kaul, Sandra Bühler, Rainer Pepperkok, Thomas Lengauer, Mario Albrecht, Roland Eils, Peter Schirmacher, Volker Lohmann, and Ralf Bartenschlager
    Cell Host & Microbe 9 (1): 32-45, 2011
  6. Protein-protein interactions: analysis and prediction
    Dmitrij Frishman, Mario Albrecht, Hagen Blankenburg, Peer Bork, Eoghan D. Harrington, Henning Hermjakob, Lars J. Jensen, David A. Juan, Thomas Lengauer, Philipp Pagel, Vincent Schachter, and Alfonso Valencia
    In: Modern Genome Annotation - The Biosapiens Network, 2009, 353-410
  7. DASMIweb: online integration, analysis and assessment of distributed protein interaction data
    Hagen Blankenburg, Fidel Ramírez, Joachim Büch, and Mario Albrecht
    Nucleic Acids Research 37 (Web Server issue): W122-W128, 2009
  8. DASMI: exchanging, annotating and assessing molecular interaction data
    Hagen Blankenburg, Robert D. Finn, Andreas Prlić, Andrew M. Jenkinson, Fidel Ramírez, Dorothea Emig, Sven-Eric Schelhorn, Joachim Büch, Thomas Lengauer, and Mario Albrecht
    Bioinformatics 25 (10): 1321-1328, 2009
  9. Integrating biological data - the Distributed Annotation System
    Andrew M. Jenkinson, Mario Albrecht, Ewan Birney, Hagen Blankenburg, Thomas Down, Robert D. Finn, Henning Hermjakob, Tim J. P. Hubbard, Rafael C. Jimenez, Philip Jones, Andreas Kähäri, Eugene Kulesha, José R. Macías, Gabrielle A. Reeves, and Andreas Prlić
    BMC Bioinformatics 9 (Suppl. 8): S3.1-7, 2008
  10. A Distributed Annotation System for Molecular Interactions
    Hagen Blankenburg
    Ruprecht Karl Universität Heidelberg; Universität Heilbronn, 2007
  11. The implications of alternative splicing in the ENCODE protein complement
    Michael L. Tress, Pier L. Martelli, Adam Frankish, Gabrielle A. Reeves, Jan J. Wesselink, Corin Yeats, Páll Í. Ólason, Mario Albrecht, Hedi Hegyi, Alejandro Giorgetti, Domenico Raimondo, Julien Lagarde, Roman A. Laskowski, Gonzalo López, Michael I. Sadowski, James D. Watson, Piero Fariselli, Ivan Rossi, Alinda Nagy, Wang Kai, Zenia Størling, Massimiliano Orsini, Yassen Assenov, Hagen Blankenburg, Carola Huthmacher, Fidel Ramírez, Andreas Schlicker, France Denoued, Phil Jones, Samuel Kerrien, Sandra Orchard, Stylianos E. Antonarakis, Alexandre Reymond, Ewan Birney, Søren Brunak, Rita Casadio, Roderic Guigo, Jennifer Harrow, Henning Hermjakob, David T. Jones, Thomas Lengauer, Christine A. Orengo, László Patthy, Janet M. Thornton, Anna Tramontano, and Alfonso Valencia
    Proceedings of the National Academy of Sciences 104 (13): 5495-5500, 2007