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MPI-INF D3 Publications

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Your search returned the following 90 documents:

  1. Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
    David Ellinghaus, Hu Zhang, Sebastian Zeissig, Simone Lipinski, Andreas Till, Tao Jiang, Björn Stade, Yana Bromberg, Eva Ellinghaus, Andreas Keller, Manuel A. Rivas, Jurgita Skieceviciene, Nadezhda T. Doncheva, Xiao Liu, Qing Liu, Fuman Jiang, Michael Forster, Gabriele Mayr, Mario Albrecht, Robert Häsler, Bernhard O. Boehm, Jane Goodall, Carlo R. Berzuini, James Lee, Vibeke Andersen, Ulla Vogel, Limas Kupcinskas, Manfred Kayser, Michael Krawczak, Susanna Nikolaus, Rinse K. Weersma, Cyriel Y. Ponsioen, Miquel Sans, Cisca Wijmenga, David P. Strachan, Wendy L. McArdle, Séverine Vermeire, Paul Rutgeerts, Jeremy D. Sanderson, Christopher G. Mathew, Morten H. Vatn, Jun Wang, Markus M. Nöthen, Richard H. Duerr, Carsten Büning, Stephan Brand, Jürgen Glas, Juliane Winkelmann, Thomas Illig, Anna Latiano, Vito Annese, Jonas Halfvarson, Mauro D'Amato, Mark J. Daly, Michael Nothnagel, Tom H. Karlsen, Suresh Subramani, Philip Rosenstiel, Stefan Schreiber, Miles Parkes, and Andre Franke
    Gastroenterology 145 (2): 339-347, 2013
  2. Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
    Jimmy Z. Liu, Johannes Roksund Hov, Trine Folseraas, Eva Ellinghaus, Simon M. Rushbrook, Nadezhda T. Doncheva, Ole A. Andreassen, Rinse K. Weersma, Tobias J. Weismuller, Bertus Eksteen, Pietro Invernizzi, Gideon M. Hirschfield, Daniel Nils Gotthardt, Albert Pares, David Ellinghaus, Tejas Shah, Brian D. Juran, Piotr Milkiewicz, Christian Rust, Christoph Schramm, Tobias Muller, Brijesh Srivastava, Georgios Dalekos, Markus M. Nothen, Stefan Herms, Juliane Winkelmann, Mitja Mitrovic, Felix Braun, Cyriel Y. Ponsioen, Peter J. P. Croucher, Martina Sterneck, Andreas Teufel, Andrew L. Mason, Janna Saarela, Virpi Leppa, Ruslan Dorfman, Domenico Alvaro, Annarosa Floreani, Suna Onengut-Gumuscu, Stephen S. Rich, Wesley K. Thompson, Andrew J. Schork, Sigrid Naess, Ingo Thomsen, Gabriele Mayr, Inke R. Konig, Kristian Hveem, Isabelle Cleynen, Javier Gutierrez-Achury, Isis Ricano-Ponce, David van Heel, Einar Bjornsson, Richard N. Sandford, Peter R. Durie, Espen Melum, Morten H. Vatn, Mark S. Silverberg, Richard H. Duerr, Leonid Padyukov, Stephan Brand, Miquel Sans, Vito Annese, Jean-Paul Achkar, Kirsten Muri Boberg, Hanns-Ulrich Marschall, Olivier Chazouilleres, Christopher L. Bowlus, Cisca Wijmenga, Erik Schrumpf, Severine Vermeire, Mario Albrecht, The UK-PSCSC Consortium, The International IBD Genetics Consortium, John D. Rioux, Graeme Alexander, Annika Bergquist, Judy Cho, Stefan Schreiber, Michael P. Manns, Martti Farkkila, Anders M. Dale, Roger W. Chapman, Konstantinos N. Lazaridis, The International PSC Study Group, Andre Franke, Carl A. Anderson, and Tom H. Karlsen
    Nature Genetics 45 (6): 670-677, 2013
  3. NetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules
    Tim Kacprowski, Nadezhda T. Doncheva, and Mario Albrecht
    Bioinformatics 29 (11): 1471-1473, 2013
    [PDF: Download: Bioinformatics-2013-Kacprowski-1471-3.pdf]
  4. Profiling of parkin-binding partners using tandem affinity purification
    Alessandra Zanon, Aleksandar Rakovic, Hagen Blankenburg, Nadezhda T. Doncheva, Christine Schwienbacher, Alice Serafin, Adrian Alexa, Christian X. Weichenberger, Mario Albrecht, Christine Klein, Andrew A. Hicks, Peter P. Pramstaller, Francisco S. Domingues, and Irene Pichler
    PLoS ONE 8 (11): 1-17, 2013
  5. Computational Biology
    Thomas Lengauer, Mario Albrecht, and Francisco S. Domingues
    In: Encyclopedia of Molecular Cell Biology and Molecular Medicine, 2012, 1-71
  6. Functional characterization of human genes from exon expression and RNA interference results
    Dorothea Emig, Hagen Blankenburg, Fidel Ramírez, and Mario Albrecht
    In: Bioinformatics and Drug Discovery, 2012, 33-53
  7. Mining GO annotations for improving annotation consistency
    Daniel Faria, Andreas Schlicker, Catia Pesquita, Hugo Bastos, António E N Ferreira, Mario Albrecht, and André O Falcão
    PLoS ONE 7 (7): e40519,1-e40519,7, 2012
  8. Novel search method for the discovery of functional relationships
    Fidel Ramírez, Glenn Lawyer, and Mario Albrecht
    Bioinformatics 28 (2): 269-276, 2012
  9. Recent approaches to the prioritization of candidate disease genes
    Nadezhda T Doncheva, Tim Kacprowski, and Mario Albrecht
    Wiley Interdisciplinary Reviews: Systems Biology and Medicine 4 (5): 429-442, 2012
  10. Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove
    Ágnes Garai, András Zeke, Gergo Gógl, Imre Töro, Ferenc Fördos, Hagen Blankenburg, Tünde Bárkai, János Varga, Anita Alexa, Dorothea Emig, Mario Albrecht, and Attila Reményi
    Science Signaling 5 (245): ra74,1-ra74,14, 2012
  11. Topological analysis and interactive visualization of biological networks and protein structures
    Nadezhda T Doncheva, Yassen Assenov, Francisco S. Domingues, and Mario Albrecht
    Nature Protocols 7 (4): 670-685, 2012
  12. Analyzing and visualizing residue networks of protein structures
    Nadezhda T. Doncheva, Karsten Klein, Francisco S. Domingues, and Mario Albrecht
    Trends in Biochemical Sciences 36 (4): 179-182, 2011
  13. Comprehensive cluster analysis with Transitivity Clustering
    Tobias Wittkop, Dorothea Emig, Anke Truss, Mario Albrecht, Sebastian Böcker, and Jan Baumbach
    Nature Protocols 6 (3): 285-295, 2011
  14. Inferring physical protein contacts from large-scale purification data of protein complexes
    Sven-Eric Schelhorn, Julián Mestre, Elena Zotenko, and Mario Albrecht
    Molecular & Cellular Proteomics 10 (6): M110.004929,1-M110.004929,15, 2011
  15. Measuring and analyzing tissue specificity of human genes and protein complexes
    Dorothea Emig, Tim Kacprowski, and Mario Albrecht
    EURASIP Journal on Bioinformatics and Systems Biology 2011 (1): 5,1-5,6, 2011
  16. PSICQUIC and PSISCORE: accessing and scoring molecular interactions
    Bruno Aranda, Hagen Blankenburg, Samuel Kerrien, Fiona S. Brinkman, Arnaud Ceol, Emilie Chautard, Jose M. Dana, Javier De Las Rivas, Marine Dumousseau, Eugenia Galeota, Anna Gaulton, Johannes Goll, Robert E. W. Hancock, Ruth Isserlin, Rafael C. Jimenez, Jules Kerssemakers, Jyoti Khadake, David J. Lynn, Magali Michaut, Gavin O'Kelly, Keiichiro Ono, Sandra Orchard, Carlos Prieto, Sabry Razick, Olga Rigina, Lukasz Salwinski, Milan Simonovic, Sameer Velankar, Andrew Winter, Guanming Wu, Gary D. Bader, Gianni Cesareni, Ian M. Donaldson, David Eisenberg, Gerard J. Kleywegt, John Overington, Sylvie Ricard-Blum, Mike Tyers, Mario Albrecht, and Henning Hermjakob
    Nature Methods 8 (7): 528-529, 2011
  17. Recruitment and activation of a lipid kinase by hepatitis C virus NS5A is essential for integrity of the membranous replication compartment
    Simon Reiss, Ilka Rebhan, Perdita Backes, Ines Romero-Brey, Holger Erfle, Petr Matula, Lars Kaderali, Marion Poenisch, Hagen Blankenburg, Marie-Sophie Hiet, Thomas Longerich, Sarah Diehl, Fidel Ramírez, Tamas Balla, Karl Rohr, Artur Kaul, Sandra Bühler, Rainer Pepperkok, Thomas Lengauer, Mario Albrecht, Roland Eils, Peter Schirmacher, Volker Lohmann, and Ralf Bartenschlager
    Cell Host & Microbe 9 (1): 32-45, 2011
  18. Structure collisions between interacting proteins
    Dorothea Emig, Oliver Sander, Gabriele Mayr, and Mario Albrecht
    PLoS ONE 6 (6): e19581,1-e19581,7, 2011
  19. Tissue-specific proteins and functional implications
    Dorothea Emig and Mario Albrecht
    Journal of Proteome Research 10 (4): 1893-1903, 2011
  20. DIDO: a disease-determinants ontology from web sources
    Victoria Nebot, Min Ye, Mario Albrecht, Jae-Hong Eom, and Gerhard Weikum
    In: Proceedings of the 20th International Conference on World Wide Web (WWW 2011), Hyderabad, India, 2011, 237-240
  21. Color blindness
    Mario Albrecht
    Nature Methods 7 (10): 775 p., 2010
  22. Dimerization of the hepatitis C virus nonstructural protein 4B depends on the integrity of an aminoterminal basic leucine zipper
    Martin-Walter Welker, Christoph Welsch, Aline Meyer, Iris Antes, Mario Albrecht, Nicole Forestier, Bernd Kronenberger, Thomas Lengauer, Albrecht Piiper, Stefan Zeuzem, and Christoph Sarrazin
    Protein Science 19 (7): 1327-1336, 2010
  23. Finding scaffold proteins in interactomes
    Fidel Ramírez and Mario Albrecht
    Trends in Cell Biology 20 (1): 2-4, 2010
  24. Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL)
    Andre Franke, Tobias Balschun, Christian Sina, David Ellinghaus, Robert Häsler, Gabriele Mayr, Mario Albrecht, Michael Wittig, Eva Buchert, Susanna Nikolaus, Christian Gieger, H. Erich Wichmann, Jurgita Sventoraityte, Limas Kupcinskas, Clive M. Onnie, Maria Gazouli, Nicholas P. Anagnou, David Strachan, Wendy L. McArdle, Christopher G. Mathew, Paul Rutgeerts, Séverine Vermeire, Morten H. Vatn, Michael Krawczak, Philip Rosenstiel, Tom H. Karlsen, and Stefan Schreiber
    Nature Genetics 42 (4): 292-294, 2010
  25. Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2
    Eva Ellinghaus, David Ellinghaus, Philip E. Stuart, Rajan P. Nair, Sophie Debrus, John V. Raelson, Majid Belouchi, Hélène Fournier, Claudia Reinhard, Jun Ding, Yun Li, Trilokraj Tejasvi, Johann Gudjonsson, Stefan W. Stoll, John J. Voorhees, Sylviane Lambert, Stephan Weidinger, Bernadette Eberlein, Manfred Kunz, Proton Rahman, Dafna D. Gladman, Christian Gieger, H. Erich Wichmann, Tom H. Karlsen, Gabriele Mayr, Mario Albrecht, Dieter Kabelitz, Ulrich Mrowietz, Gonçalo R. Abecasis, James T. Elder, Stefan Schreiber, Michael Weichenthal, and Andre Franke
    Nature Genetics 42 (11): 991-995, 2010
  26. Improving disease gene prioritization using the semantic similarity of Gene Ontology terms
    Andreas Schlicker, Thomas Lengauer, and Mario Albrecht
    Bioinformatics 26 (18): i561-i567, 2010
  27. Intragenic allele pyramiding combines different specificities of wheat Pm3 resistance alleles
    Susanne Brunner, Severine Hurni, Philipp Streckeisen, Gabriele Mayr, Mario Albrecht, Nabila Yahiaoui, and Beat Keller
    The Plant Journal 64 (3): 433-445, 2010
  28. Measuring and analyzing tissue specificity of human genes and protein complexes
    Dorothea Emig, Tim Kacprowski, and Mario Albrecht
    In: Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, Luxembourg, 2010, 27-30
  29. On open problems in biological network visualization
    Mario Albrecht, Andreas Kerren, Karsten Klein, Oliver Kohlbacher, Petra Mutzel, Wolfgang Paul, Falk Schreiber, and Michael Wybrow
    In: Graph Drawing : 17th International Symposium, GD 2009, Chicago, IL, USA, 2010, 256-267
  30. Partitioning biological data with transitivity clustering
    Tobias Wittkop, Dorothea Emig, Sita Lange, Sven Rahmann, Mario Albrecht, John H. Morris, Sebastian Böcker, Jens Stoye, and Jan Baumbach
    Nature Methods 7 (6): 419-420, 2010
  31. AltAnalyze and DomainGraph: analyzing and visualizing exon expression data
    Dorothea Emig, Nathan Salomonis, Jan Baumbach, Thomas Lengauer, Bruce R. Conklin, and Mario Albrecht
    Nucleic Acids Research 38 (Suppl. 2): W755-W762, 2010
  32. FunSimMat update: new features for exploring functional similarity
    Andreas Schlicker and Mario Albrecht
    Nucleic Acids Research 38 (Database issue): D244-D248, 2010
  33. Protein-protein interactions: analysis and prediction
    Dmitrij Frishman, Mario Albrecht, Hagen Blankenburg, Peer Bork, Eoghan D. Harrington, Henning Hermjakob, Lars J. Jensen, David A. Juan, Thomas Lengauer, Philipp Pagel, Vincent Schachter, and Alfonso Valencia
    In: Modern Genome Annotation - The Biosapiens Network, 2009, 353-410
  34. DASMIweb: online integration, analysis and assessment of distributed protein interaction data
    Hagen Blankenburg, Fidel Ramírez, Joachim Büch, and Mario Albrecht
    Nucleic Acids Research 37 (Web Server issue): W122-W128, 2009
  35. DASMI: exchanging, annotating and assessing molecular interaction data
    Hagen Blankenburg, Robert D. Finn, Andreas Prlić, Andrew M. Jenkinson, Fidel Ramírez, Dorothea Emig, Sven-Eric Schelhorn, Joachim Büch, Thomas Lengauer, and Mario Albrecht
    Bioinformatics 25 (10): 1321-1328, 2009
  36. An integrative approach for predicting interactions of protein regions
    Sven-Eric Schelhorn, Thomas Lengauer, and Mario Albrecht
    Bioinformatics 24 (16): i35-i41, 2008
  37. Computing topological parameters of biological networks
    Yassen Assenov, Fidel Ramírez, Sven-Eric Schelhorn, Thomas Lengauer, and Mario Albrecht
    Bioinformatics 24 (2): 282-284, 2008
  38. Integrating biological data - the Distributed Annotation System
    Andrew M. Jenkinson, Mario Albrecht, Ewan Birney, Hagen Blankenburg, Thomas Down, Robert D. Finn, Henning Hermjakob, Tim J. P. Hubbard, Rafael C. Jimenez, Philip Jones, Andreas Kähäri, Eugene Kulesha, José R. Macías, Gabrielle A. Reeves, and Andreas Prlić
    BMC Bioinformatics 9 (Suppl. 8): S3.1-7, 2008
  39. Integrating expression data with domain interaction networks
    Dorothea Emig, Melissa S. Cline, Thomas Lengauer, and Mario Albrecht
    Bioinformatics 24 (21): 2546-2548, 2008
  40. Integrative visual analysis of the effects of alternative splicing on protein domain interaction networks
    Dorothea Emig, Melissa S. Cline, Karsten Klein, Anne Kunert, Petra Mutzel, Thomas Lengauer, and Mario Albrecht
    Journal of Integrative Bioinformatics 5 (2): 101-115, 2008
  41. Molecular basis of telaprevir resistance due to V36 and T54 mutations in the NS3-4A protease of HCV
    Christoph Welsch, Francisco S. Domingues, Simone Susser, Iris Antes, Christoph Hartmann, Gabriele Mayr, Andreas Schlicker, Christoph Sarrazin, Mario Albrecht, Stefan Zeuzem, and Thomas Lengauer
    Genome Biology 9 (1): R16 p., 2008
    [PDF: Download: Welsch2008.pdf]
  42. Sequence variants in IL10, ARPC2, and multiple other loci contribute to ulcerative colitis
    Andre Franke, Tobias Balschun, Tom H. Karlsen, Jurgita Sventoraityte, Susanna Nikolaus, Gabriele Mayr, Francisco S. Domingues, Mario Albrecht, Michael Nothnagel, David Ellinghaus, Christian Sina, Clive M. Onnie, Rinse K. Weersma, Pieter C. F. Stokkers, Cisca Wijmenga, Maria Gazouli, David Strachan, Wendy L. McArdle, Séverine Vermeire, Paul Rutgeers, Philip Rosenstiel, Michael Krawczak, Morten H. Vatn, the IBSEN study group, Christopher G. Mathew, and Stefan Schreiber
    Nature Genetics 40 (11): 1319-1323, 2008
  43. Structure-function analysis of the NB-ARC domain of plant disease resistance proteins
    Gerben Van Ooijen, Gabriele Mayr, Mobien M. A. Kasiem, Mario Albrecht, Ben J. C. Cornelissen, and Frank L. W. Takken
    Journal of Experimental Botany 59 (6): 1383-1397, 2008
  44. Transcomplementation, but not physical association of the CC-NB-ARC and LRR domains of tomato R protein Mi-1.2 is altered by mutations in the ARC2 subdomain
    Gerben Van Ooijen, Gabriele Mayr, Mario Albrecht, Ben J. C. Cornelissen, and Frank L. W. Takken
    Molecular Plant 1 (3): 401-410, 2008
  45. Visualizing domain interaction networks and the impact of alternative splicing events
    Dorothea Emig, Karsten Klein, Anne Kunert, Petra Mutzel, and Mario Albrecht
    In: Proceedings of the 5th International Conference on BioMedical Visualization (MediVis): Information Visualization in Medical and Biomedical Informatics, London, United Kingdom, 2008, 36-43
  46. FunSimMat: a comprehensive functional similarity database
    Andreas Schlicker and Mario Albrecht
    Nucleic Acids Research 36 (Database Issue): D434-D439, 2008

  47. A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1
    Jochen Hampe, Andre Franke, Philip Rosenstiel, Andreas Till, Markus Teuber, Klaus Huse, Mario Albrecht, Gabriele Mayr, Francisco M. De La Vega, Jason Briggs, Simone Günther, Natalie J. Prescott, Clive M. Onnie, Robert Häsler, Bence Sipos, Ulrich R. Fölsch, Thomas Lengauer, Matthias Platzer, Christopher G. Mathew, Michael Krawczak, and Stefan Schreiber
    Nature Genetics 39 (2): 207-211, 2007
  48. A network-based analysis of polyanion-binding proteins utilizing human protein arrays
    Nazila Salamat-Miller, Jianwen Fang, Christopher W. Seidel, Yassen Assenov, Mario Albrecht, and C. Russell Middaugh
    Journal of Biological Chemistry 282 (14): 10153-10163, 2007

  49. Computational analysis of human protein interaction networks
    Fidel Ramírez, Andreas Schlicker, Yassen Assenov, Thomas Lengauer, and Mario Albrecht
    Proteomics 7 (15): 2541-2552, 2007
  50. Functional evaluation of domain-domain interactions and human protein interaction networks
    Andreas Schlicker, Carola Huthmacher, Fidel Ramírez, Thomas Lengauer, and Mario Albrecht
    Bioinformatics 23 (7): 859-865, 2007

  51. Identification of PatL1, a human homolog to yeast P body component Pat1
    Nicoletta Scheller, Patricia Resa-Infante, Susana de la Luna, Rui Pedro Galao, Mario Albrecht, Lars Kaestner, Peter Lipp, Thomas Lengauer, Andreas Meyerhans, and Juana Díez
    Biochimica et Biophysica Acta - Molecular Cell Research 1773 (12): 1786-1792, 2007
  52. Structural and functional comparison of the non-structural protein 4B of flaviviridae
    Christoph Welsch, Mario Albrecht, Jochen Maydt, E. Herrmann, M.W. Welker, C. Sarrazin, A. Scheidig, Thomas Lengauer, and S. Zeuzem
    Journal of Molecular Graphics and Modeling 26 (2): 546-557, 2007
  53. Systematic association mapping identifies NELL1 as a novel IBD disease gene
    Andre Franke, Jochen Hampe, Philip Rosenstiel, Christoph Becker, Florian Wagner, Robert Häsler, Randall D. Little, Klaus Huse, Andreas Ruether, Tobias Balschun, Michael Wittig, Abdou ElSharawy, Gabriele Mayr, Mario Albrecht, Natalie J. Prescott, Clive M. Onnie, Hélène Fournier, Tim Keith, Uwe Radelof, Matthias Platzer, Christopher G. Mathew, Monika Stoll, Michael Krawczak, Peter Nürnberg, and Stefan Schreiber
    PLoS ONE 2 (8): e691.1-13, 2007
  54. The implications of alternative splicing in the ENCODE protein complement
    Michael L. Tress, Pier L. Martelli, Adam Frankish, Gabrielle A. Reeves, Jan J. Wesselink, Corin Yeats, Páll Í. Ólason, Mario Albrecht, Hedi Hegyi, Alejandro Giorgetti, Domenico Raimondo, Julien Lagarde, Roman A. Laskowski, Gonzalo López, Michael I. Sadowski, James D. Watson, Piero Fariselli, Ivan Rossi, Alinda Nagy, Wang Kai, Zenia Størling, Massimiliano Orsini, Yassen Assenov, Hagen Blankenburg, Carola Huthmacher, Fidel Ramírez, Andreas Schlicker, France Denoued, Phil Jones, Samuel Kerrien, Sandra Orchard, Stylianos E. Antonarakis, Alexandre Reymond, Ewan Birney, Søren Brunak, Rita Casadio, Roderic Guigo, Jennifer Harrow, Henning Hermjakob, David T. Jones, Thomas Lengauer, Christine A. Orengo, László Patthy, Janet M. Thornton, Anna Tramontano, and Alfonso Valencia
    Proceedings of the National Academy of Sciences 104 (13): 5495-5500, 2007

  55. Variants in a novel epidermal collagen gene (COL29A1) are associated with atopic dermatitis
    Cilla Söderhäll, Ingo Marenholz, Tamara Kerscher, Franz Rüschendorf, Jorge Esparza-Gordillo, Margitta Worm, Christoph Gruber, Gabriele Mayr, Mario Albrecht, Klaus Rohde, Herbert Schulz, Ulrich Wahn, Norbert Hubner, and Young-Ae Lee
    PLoS Biology 5 (9): e242.1952-1961, 2007
    [PDF: Download: Söderhäll.pdf]
  56. GOTax: investigating biological processes and biochemical activities along the taxonomic tree
    Andreas Schlicker, Jörg Rahnenführer, Mario Albrecht, Thomas Lengauer, and Francisco S. Domingues
    Genome Biology 8 (3): R33.1-10, 2007
    [PDF: Download: Schlicker2007.pdf]
  57. A network-based analysis of polyanion-binding proteins utilizing yeast protein arrays
    Nazila Salamat-Miller, Jianwen Fang, Christopher W. Seidel, Aaron M. Smalter, Yassen Assenov, Mario Albrecht, and C. Russell Middaugh
    Molecular and Cellular Proteomics 5 (12): 2263-2278, 2006
  58. Amino acid variations in hepatitis C virus p7 and sensitivity to antiviral combination therapy with amantadine in chronic hepatitis C
    Ulrike Mihm, Natalia Grigorian, Christoph Welsch, Eva Herrmann, Bernd Kronenberger, Gerlinde Teuber, Michael von Wagner, Wolf-Peter Hofmann, Mario Albrecht, Thomas Lengauer, Stefan Zeuzem, and Christoph Sarrazin
    Antiviral Therapy 11 (4): 507-519, 2006
  59. An arginine/lysine-rich motif is crucial for VCP/p97-mediated modulation of ataxin-3 fibrillogenesis
    Annett Boeddrich, Sébastien Gaumer, Annette Haacke, Nikolay Tzvetkov, Mario Albrecht, Bernd O. Evert, Eva C. Müller, Rudi Lurz, Peter Breuer, Nancy Schugardt, Stephanie Plaßmann, Kexiang Xu, John M. Warrick, Jaana Suopanki, Ullrich Wüllner, Ronald Frank, Ulrich F. Hartl, Nancy M. Bonini, and Erich E. Wanker
    EMBO Journal 25 (7): 1547-1558, 2006
  60. Combining protein structure prediction with experiments and functional information
    Mario Albrecht
    Doctoral dissertation, Universität des Saarlandes, 2006
  61. Functional evaluation of domain-domain interactions and human protein interaction networks
    Andreas Schlicker, Carola Huthmacher, Fidel Ramírez, Thomas Lengauer, and Mario Albrecht
    In: German Conference on Bioinformatics (GCB 2006), Tübingen, Germany, 2006, 115-126
  62. Mutations in the MutSalpha interaction interface of MLH1 can abolish DNA mismatch repair
    Guido Plotz, Christoph Welsch, Luis Giron-Monzon, Peter Friedhoff, Mario Albrecht, Albrecht Piiper, Ricardo M. Biondi, Thomas Lengauer, Stefan Zeuzem, and Jochen Raedle
    Nucleic Acids Research 34 (22): 6574-6586, 2006
    [PDF: Download: Plotz.pdf]
  63. Mutations in the NB-ARC domain of I-2 that impair ATP hydrolysis cause autoactivation
    Wladimir I. Tameling, Jack H. Vossen, Mario Albrecht, Thomas Lengauer, Jan A. Berden, Michel A. Haring, Ben J.C. Cornelissen, and Frank L. W. Takken
    Plant Physiology 140 (4): 1233-1245, 2006
  64. Resistance proteins: molecular switches of plant defence
    Frank L. W. Takken, Mario Albrecht, and Wladimir I. Tameling
    Current Opinion in Plant Biology 9 (4): 383-390, 2006
  65. Update on the domain architectures of NLRs and R proteins
    Mario Albrecht and Frank L. W. Takken
    Biochemical and Biophysical Research Communications 339 (2): 459-462, 2006
  66. A new CARD15 mutation in Blau syndrome
    Marjan M. Van Duist, Mario Albrecht, Marta Podswiadek, Daniela Giachino, Thomas Lengauer, Leonardo Punzi, and Mario De Marchi
    European Journal of Human Genetics 13 (6): 742-747, 2005
  67. An integrative approach to gain insights into the cellular function of human ataxin-2
    Markus Ralser, Mario Albrecht, Ute Nonhoff, Thomas Lengauer, Hans Lehrach, and Sylvia Krobitsch
    Journal of Molecular Biology 346 (1): 203-214, 2005
  68. Ataxin-2 and huntingtin interact with endophilin-A complexes to function in plastin-associated pathways
    Markus Ralser, Ute Nonhoff, Mario Albrecht, Thomas Lengauer, Erich E. Wanker, Hans Lehrach, and Sylvia Krobitsch
    Human Molecular Genetics 14 (19): 2893-2909, 2005
  69. Clinical significance of in vitro replication-enhancing mutations of the hepatitis C virus (HCV) replicon in patients with chronic HCV infection
    Christoph Sarrazin, Ulrike Mihm, Eva Herrmann, Christoph Welsch, Mario Albrecht, Ulrike Sarrazin, Stella Traver, Thomas Lengauer, and Stefan Zeuzem
    The Journal of Infectious Diseases 192 (10): 1710-1719, 2005
  70. Clinical significance of in vitro replication-enhancing mutations of the hepatitis C virus (HCV) replicon in patients with chronic HCV infection.
    Thomas Lengauer, Mario Albrecht, C. Sarrazin, U. Mihm, E. Herrmann, Christoph Welsch, U. Sarrazin, S. Traver, and S. Zeuzem
    Journal of Infectious Diseases 192 (10): 1710-1719, 2005
  71. Decomposing protein networks into domain-domain interactions
    Mario Albrecht, Carola Huthmacher, Silvio C.E. Tosatto, and Thomas Lengauer
    Bioinformatics 21 (Suppl. 2): ii220-ii221, 2005
  72. Dissection of the inflammatory bowel disease transcriptome using genome-wide cDNA microarrays identifies novel candidate disease genes
    Christine M. Costello, Nancy Mah, Robert Häsler, Philip Rosenstiel, Georg H. Waetzig, Andreas Hahn, Tim Lu, Yesim Gurbuz, Susanna Nikolaus, Mario Albrecht, Jochen Hampe, Ralph Lucius, Günther Klöppel, Holger Eickhoff, Hans Lehrach, Thomas Lengauer, and Stefan Schreiber
    PLoS Medicine 2 (8): 771-787, 2005
  73. Diversity and functional plasticity of eukaryotic selenoproteins: Identification and characterization of the SelJ family
    Sergi Castellano, Alexey V. Lobanov, Charles Chapple, Sergey V. Novoselov, Mario Albrecht, Deame Hua, Alain Lescure, Thomas Lengauer, Alain Krol, Vadim N. Gladyshev, and Roderic Guigó
    Proceedings of the National Academy of Sciences 102 (45): 16188-16193, 2005
  74. Genetics of Crohn disease, an archetypal inflammatory barrier disease
    Stefan Schreiber, Philip Rosenstiel, Mario Albrecht, Jochen Hampe, and Michael Krawczak
    Nature Reviews Genetics 6 (5): 376-388, 2005
  75. Sarcoidosis is associated with a truncating splice site mutation in BTNL2
    Ruta Valentonyte, Jochen Hampe, Klaus Huse, Philip Rosenstiel, Mario Albrecht, Annette Stenzel, Marion Nagy, Karoline I. Gaede, Andre Franke, Robert Haesler, Andreas Koch, Thomas Lengauer, Dirk Seegert, Norbert Reiling, Stefan Ehlers, Eberhard Schwinger, Mathias Platzer, Michael Krawczak, Joachim Müller-Quernheim, Manfred Schürmann, and Stefan Schreiber
    Nature Genetics 37 (4): 357-364, 2005
  76. Structural and functional analysis of a novel mutation of CYP21B in a heterozygote carrier of 21-hydroxylase deficiency
    Jörg Bojunga, Christoph Welsch, Iris Antes, Mario Albrecht, Thomas Lengauer, and Stefan Zeuzem
    Human Genetics 117 (6): 558-564, 2005
  77. The HIN domain of IFI-200 proteins consists of two OB folds
    Mario Albrecht, Divaker Choubey, and Thomas Lengauer
    Biochemical and Biophysical Research Communications 327 (3): 679-687, 2005
  78. LRRK2 mutations and parkinsonism
    Mario Albrecht
    The Lancet 365 (9466): 1230 p., 2005
  79. Genetic variation in DLG5 is associated with inflammatory bowel disease
    Monika Stoll, Brit Corneliussen, Christine M. Costello, Georg H. Waetzig, Bjorn Mellgard, W. Andreas Koch, Philip Rosenstiel, Mario Albrecht, Peter J.P. Croucher, Dirk Seegert, Susanna Nikolaus, Jochen Hampe, Thomas Lengauer, Stefan Pierrou, Ulrich R. Foelsch, Christopher G. Mathew, Maria Lagerstrom-Fermer, and Stefan Schreiber
    Nature Genetics 36 (5): 376-380, 2004
  80. Novel Sm-like proteins with long C-terminal tails and associated methyltransferases
    Mario Albrecht and Thomas Lengauer
    FEBS Letters 569 (1-3): 18-26, 2004
  81. Structural and functional analysis of ataxin-2 and ataxin-3
    Mario Albrecht, Michael Golatta, Ullrich Wüllner, and Thomas Lengauer
    European Journal of Biochemistry 271 (15): 3155-3170, 2004
  82. Survey on the PABC recognition motif PAM2
    Mario Albrecht and Thomas Lengauer
    Biochemical and Biophysical Research Communications 316 (1): 129-138, 2004
  83. Disease-associated variants in PYPAF1 and NOD2 result in similar alterations of conserved sequence
    Mario Albrecht, Thomas Lengauer, and Stefan Schreiber
    Bioinformatics 19: 2171-2175, 2003. Note: In press.
  84. Identification of mammalian orthologs associates PYPAF5 with distinct functional roles
    Mario Albrecht, Francisco S. Domingues, Stefan Schreiber, and Thomas Lengauer
    FEBS Letters 538 (1-3): 173-177, 2003
  85. Pyranose oxidase identified as a member of the GMC oxidoreductase family
    Mario Albrecht and Thomas Lengauer
    Bioinformatics 19 (10): 1216-1220, 2003
  86. Simple consensus procedures are effective and sufficient in secondary structure prediction
    Mario Albrecht, Silvio C.E. Tosatto, Thomas Lengauer, and Giorgio Valle
    Protein Engineering 16 (7): 459-462, 2003
  87. Structural localization of disease-associated sequence variations in the NACHT and LRR domains of PYPAF1 and NOD2
    Mario Albrecht, Francisco S. Domingues, Stefan Schreiber, and Thomas Lengauer
    FEBS Letters 554 (3): 520-528, 2003
  88. Structural modeling of ataxin-3 reveals distant homology to adaptins
    Mario Albrecht, Daniel Hoffmann, Bernd O. Evert, Ina Schmitt, Ullrich Wüllner, and Thomas Lengauer
    Proteins: Structure, Function, and Genetics 50 (2): 355-370, 2003
  89. A new method for the fast solution of protein-3D-structures, combining experiments and bioinformatics
    Daniel Hoffmann, Volker Schnaible, Stephan, Wefing, Mario Albrecht, Daniel Hanisch, and Ralf Zimmer
    In: Coupling of Biological and Electronic Systems: Proceedings of the 2nd Caesarium, Bonn, 1-3 November 2000, Bonn, Germany, 2002, 59-78
  90. Improving fold recognition of protein threading by experimental distance constraints
    Mario Albrecht, Daniel Hanisch, Ralf Zimmer, and Thomas Lengauer
    In Silico Biology 2 (3): 325-337, 2002
    [PDF: Download: mario albrecht.pdf]