MPI-INF D3 Publications: Journal Article: {GOTax}: investigating biological processes and biochemical activities along the taxonomic tree

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Author, Editor

Author(s):

Schlicker, Andreas
Rahnenführer, Jörg
Albrecht, Mario
Lengauer, Thomas
Domingues, Francisco S.

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BibTeX cite key*:

Schlicker2007

Title

Title*:	GOTax: investigating biological processes and biochemical activities along the taxonomic tree
Attachments:	Schlicker2007.pdf (1019.24 KB)

Journal

Journal Title*:	Genome Biology	Journal's URL:	http://genomebiology.com/
Download URL for the article:	http://dx.doi.org/10.1186/gb-2007-8-3-r33	Language:	English

Publisher

Publisher's Name:	BioMed Central	Publisher's URL:	http://www.biomedcentral.com/home/
Publisher's Address:	London, UK	ISSN:	1465-6906

Vol, No, Year, pp.

Volume:	8	Number:	3
Month:		Year*:	2007
Pages:	R33.1-10	Number of VG Pages:
Sequence Number:		DOI:	10.1186/gb-2007-8-3-r33

Abstract, Links, (C)

Note:
(LaTeX) Abstract:	We describe GOTax (http://gotax.bioinf.mpi-inf.mpg.de/), a comparative genomics platform that integrates protein annotation with protein family classification and taxonomy. User-defined sets of proteins, protein families, annotation terms or taxonomic groups can be selected and compared, allowing for the analysis of distribution of biological processes and molecular activities over different taxonomic groups. In particular, a measure of functional similarity is available for comparing proteins and protein families, establishing functional relationships independent of evolution.
URL for the Abstract:	http://genomebiology.com/2007/8/3/R33
Categories / Keywords:	Bioinformatics, Comparative Genomics, Database, GOTax, Semantic Similarity, Functional Similarity
HyperLinks / References / URLs:
Copyright Message:	© 2007 Schlicker et al.; licensee BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Personal Comments:
Download Access Level:	Public

Correlation

MPG Unit:	Max-Planck-Institut für Informatik

MPG Subunit:	Computational Biology and Applied Algorithmics
Audience:	popular
Appearance:	MPII WWW Server, MPII FTP Server, MPG publications list, university publications list, working group publication list, Fachbeirat, VG Wort

BibTeX Entry:

@MISC{Schlicker2007,
AUTHOR = {Schlicker, Andreas and Rahnenf{\"u}hrer, J{\"o}rg and Albrecht, Mario and Lengauer, Thomas and Domingues, Francisco S.},
TITLE = {{GOTax}: investigating biological processes and biochemical activities along the taxonomic tree},
JOURNAL = {Genome Biology},
PUBLISHER = {BioMed Central},
YEAR = {2007},
NUMBER = {3},
VOLUME = {8},
PAGES = {R33.1--10},
ADDRESS = {London, UK},
ISBN = {1465-6906},
DOI = {10.1186/gb-2007-8-3-r33},
}

Entry last modified by Mario Albrecht, 05/08/2009

Edit History (please click the blue arrow to see the details)

	Editor(s) Andreas Schlicker	Created 03/12/2007 12:49:51
Revisions 12. 11. 10. 9. 8.	Editor(s) Mario Albrecht Uwe Brahm Anja Becker Mario Albrecht Mario Albrecht	Edit Dates 05/08/2009 07:31:27 PM 02/28/2008 04:19:53 PM 15.02.2008 08:43:18 10/09/2007 01:31:16 AM 2007-07-02 12:01:23

Attachment Section

Schlicker2007.pdf