Previous Page | Next Page | Expand All | Collapse All | Search (Full Text)
Show entries starting with: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

	Journal Full Title / ISSN	Year	Author/Editor		Title
PNAS
	Proceedings of the National Academy of Sciences of the United States of America 0027-8424	2010	Pope, P. B. Denman, S. E. Jones, M. Tringe, S. G. Barry, K. Malfatti, S. A. McHardy, Alice Cheng, J.-F. Hugenholtz, P. McSweeney, C. S. Morrison, M.		Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
	Proceedings of the National Academy of Sciences of the United States of America 0027-8424	2010	Turnbaugh, Peter J. Quince, Christopher Faith, Jeremiah J. McHardy, Alice Yatsunenko, Tanya Niazi, Faheem Affourtit, Jason Egholm, Michael Henrissat, Bernhard Knight, Rob Gordon, Jeffrey I.		Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
	Proceedings of the National Academy of Sciences of the United States of America 1091-6490	2008	Schoen, Christoph Blom, Jochen Claus, Heike Schramm-Glück, Anja Brandt, Petra Müller, Tobias Goesmann, Alexander Joseph, Biju Konietzny, Sebastian Kurzai, Oliver Schmitt, Corinna Friedrich, Torben Linke, Burkhard Vogel, Ulrich Frosch, Matthias		Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
(Not Categorized)
	The ISME Journal 1751-7362	2012	Gilbert, Jack A. Steele, Joshua A. Caporaso, J. Gregory Steinbrück, Lars Reeder, Jens Temperton, Ben Huse, Susan McHardy, Alice C. Knight, Rob Joint, Ian Somerfield, Paul Fuhrman, Jed A. Field, Dawn		Defining seasonal marine microbial community dynamics In: The ISME Journal [6], 298-308
	Molecular Biology and Evolution 0737-4038	2012	Tusche, Christina Steinbrück, Lars McHardy, Alice Carolyn		Detecting Patches of Protein Sites of Influenza A Viruses under Positive Selection In: Molecular Biology and Evolution [29], 2063-2071
	Proceedings of the Royal Society / B, Biological Sciences 0950-1193	2011	Adams, Ben McHardy, Alice		The impact of seasonal and year-round transmission regimes on the evolution of influenza A virus In: Proceedings of the Royal Society / B, Biological Sciences [278], 2249-2256
	BMC Bioinformatics -	2011	Konietzny, Sebastian G.A. Dietz, Laura McHardy, Alice		Inferring functional modules of protein families with probabilistic topic models In: BMC Bioinformatics [12], 141
	The ISME Journal 1751-7362	2011	Lykidis, Athanasios Chen, Chia-Lung Tringe, Susannah G. McHardy, Alice Copeland, Alex Kyrpides, Nikos C. Hugenholtz, Philip Macarie, Hervé Olmos, Alejandro Monroy, Oscar Liu, Wen-Tso		Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium In: The ISME Journal [5], 122-130
	Nature Methods 1548-7091	2011	Patil, Kaustubh R. Haider, Peter Pope, Philip B. Turnbaugh, Peter J. Morrison, Mark Scheffer, Tobias McHardy, Alice		Taxonomic metagenome sequence assignment with structured output models In: Nature Methods [8], 191-192
	Science -	2011	Pope, P. B. Smith, W. Denman, S. E. Tringe, S. G. Barry, K. Hugenholtz, P. McSweeney, C. S. McHardy, Alice Morrison, M.		Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies In: Science [333], 646-648
	PLOS Pathogens 1553-7366	2009	McHardy, Alice Adams, Ben		The role of genomics in tracking the evolution of influenza A virus In: PLOS Pathogens [5], e1000566:1-e1000566:6
	The Journal of Bacteriology 0021-9193	2008	Gartemann, K. H. Abt, B. Bekel, T. Burger, A. Engemann, J. Flügel, M. Gaigalat, L. Goesmann, A. Gräfen, I. Kalinowski, J. Kaup, O. Kirchner, O. Krause, L. Linke, B. McHardy, Alice Meyer, F. Pohle, S. Rückert, C. Schneiker, S. Zellermann, E. M. Pühler, A. Eichenlaub, R. Kaiser, O. Bartels, D.		The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity In: The Journal of Bacteriology [190], 2138-2149
	Genome Research 1088-9051	2008	Holland, L. Z. Albalat, R. Azumi, K. Benito-Gutiérrez, E. Blow, M. J. Bronner-Fraser, M. Brunet, F. Butts, T. Candiani, S. Dishaw, L. J. Ferrier, D. E. Garcia-Fernàndez, J. Gibson-Brown, J. J. Gissi, C. Godzik, A. Hallböök, F. Hirose, D. Hosomichi, K. Ikuta, T. Inoko, H. Kasahara, M. Kasamatsu, J. Kawashima, T. Kimura, A. Kobayashi, M. Kozmik, Z. Kubokawa, K. Laudet, V. Litman, G. W. McHardy, Alice Meulemans, D. Nonaka, M. Olinski, R. P. Pancer, Z. Pennacchio, L. A. Pestarino, M. Rast, J. P. Rigoutsos, I. Robinson-Rechavi, M. Roch, G. Saiga, H. Sasakura, Y. Satake, M. Satou, Y. Schubert, M. Sherwood, N. Shiina, T. Takatori, N. Tello, J. Vopalensky, P. Wada, S. Xu, A. Ye, Y. Yoshida, K. Yoshizaki, F. Yu, J. K. Zhang, Q. Zmasek, C. M. de Jong, P. J. Osoegawa, K. Putnam, N. H. Rokhsar, D. S. Satoh, N. Holland, P. W.		The amphioxus genome illuminates vertebrate origins and cephalochordate biology In: Genome Research [18], 1100-1111
	Nature Biotechnology 1087-0156	2008	Kalyuzhnaya, M. G. Lapidus, A. Ivanova, N. Copeland, A. C. McHardy, Alice Szeto, E. Salamov, A. Grigoriev, I. V. Suciu, D. Levine, S. R. Markowitz, V. M. Rigoutsos, I. Tringe, S. G. Bruce, D. C. Richardson, P. M. Lidstrom, M. E. Chistoserdova, L.		High-resolution metagenomics targets specific functional types in complex microbial communities In: Nature Biotechnology [26], 1029-34
	Journal of Hybrid Computing Research -	2008	Patil, Kaustubh Akerkar, Rajendra		Tackling Traveling Salesman Problem with Random Key Genetic Algorithm In: Journal of Hybrid Computing Research [1], 10-10
	Journal of Hybrid Computing Research 0974-5858	2008	Patil, Kaustubh Shelokar, P. S. Jayaraman, V. K. Kulkarni, B. D.		Ant Colony Optimization in the Direct Ordering Gene Expression Data In: Journal of Hybrid Computing Research [1], 10-10
	Nature Methods -	2007	Mavromatis, K. Ivanova, N. Barry, K. Shapiro, H. Goltsman, E. McHardy, Alice Rigoutsos, I. Salamov, A. Korzeniewski, F. Land, M. Lapidus, A. Grigoriev, I. Richardson, P. Hugenholtz, P. Kyrpides, N. C.		Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. In: Nature Methods [4], 495-500
	Nucleic Acids Research -	2007	McHardy, Alice Krause, L. Nattkemper, T. W. Puhler, A. Stoye, J. Meyer, F.		GISMO - prokaryotic gene identification using a support vector machine for ORF classification. In: Nucleic Acids Research [32], 540-549
	Nature Methods -	2007	McHardy, Alice Martin, H. G. Tsirigos, A. Hugenholtz, P. Rigoutsos, I.		Accurate phylogenetic classification of variable-length DNA fragments. In: Nature Methods [4], 63-72
	Current Opinion in Microbiology -	2007	McHardy, Alice Rigoutsos, I.		What's in the mix? Methods for the phylogenetic classification of metagenome sequence samples. In: Current Opinion in Microbiology [10], 499-503
	Journal of General Virology -	2007	Meisinger-Henschel, Christine Schmidt, Michaela Lukassen, Susanne Linke, Burkhard Krause, Lutz Konietzny, Sebastian Goesmann, Alexander Howley, Paul Chaplin, Paul Suter, Mark Hausmann, Jürgen		Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara In: Journal of General Virology [88], 3249-3259
	Biotechnology Progress -	2007	Patil, Kaustubh Kulkarni, Abhijit		A simple visualization technique to understand the system dynamics in bioreactors In: Biotechnology Progress [23], 1101-1105
	Nature Biotechnology -	2007	Schneiker, Susanne Perlova, Olena Kaiser, Olaf Gerth, Klaus Alici, Aysel Altmeyer, Matthias Bartels, Daniela Bekel, Thomas Beyer, Stefan Bode, Edna Bode, Helge Bolten, Christoph Choudhuri, Jomuna Doss, Sabrina Elnakady, Yasser Frank, Bettina Gaigalat, Lars Goesmann, Alexander Groeger, Carolin Gross, Frank Jelsbak, Lars Jelsbak, Lotte Kalinowski, Jörn Kegler, Carsten Knauber, Tina Konietzny, Sebastian Kopp, Maren Krause, Lutz Krug, Daniel Linke, Bukhard Mahmud, Taifo Martinez-Arias, Rosa McHardy, Alice Merai, Michelle Meyer, Folker Mormann, Sascha Muñoz-Dorado, Jose Perez, Juana Pradella, Silke Rachid, Shwan Raddatz, Günter Rosenau, Frank Rückert, Christian Sasse, Florenz Scharfe, Maren Schuster, Stephan C. Suen, Garret Treuner-Lange, Anke Velicer, Gregory Vorhölter, Frank-Jörg Weissman, Kira J. Welch, Roy D. Wenzel, Silke C. Whitworth, David E. Wilhelm, Susanne Wittmann, Christoph Blöcker, Helmut Pühler, Alfred Müller, Rolf		Complete genome sequence of the myxobacterium Sorangium cellulosum. In: Nature Biotechnology [27], 281-1289
	International Journal of Immunogenetics -	2007	Vieira, J Cardoso, CS Pinto, JP Patil, Kaustubh Brazdil, P Cruz, E Mascarenhas, C Lacerda, R Gartner, A Almeida, S Alves, H Porto, G		A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans In: International Journal of Immunogenetics [34], 359-367
	American Journal of Hematology -	2007	Vieira, J Cardoso, CS Pinto, JP Patil, Kaustubh Brazdil, P Cruz, E Mascarenhas, C Lacerda, R Gartner, A Almeida, S Alves, H Porto, G		Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression? In: American Journal of Hematology [82], 509-509
	Nature -	2007	Warnecke, F. Luginbühl, P. Ivanova, N. Ghassemian, M. Richardson, T. H. Stege, J. T. Cayouette, M. McHardy, Alice Djordjevic, G. Aboushadi, N. Sorek, R. Tringe, S. G. Podar, M. Martin, H. G. Kunin, V. Dalevi, D. Madejska, J. Kirton, E. Platt, D. Szeto, E. Salamov, A. Barry, K. Mikhailova, N. Kyrpides, N. C. Matson, E. G. Ottesen, E. A. Zhang, X. Hernández, M. Murillo, C. Acosta, L. G. Rigoutsos, I. Tamayo, G. Green, B. D. Chang, C. Rubin, E. M. Mathur, E. J. Robertson, D. E. Hugenholtz, P. Leadbetter, J. R.		Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite In: Nature [450], 560-565