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#YearAuthor(s) [non member]TitleType
1
Hide details for Aboushadi, N.Aboushadi, N.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Abt, B.Abt, B.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Acosta, L. G.Acosta, L. G.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
3
Hide details for Adams, BenAdams, Ben
2011[Adams, Ben]
McHardy, Alice
The impact of seasonal and year-round transmission regimes on the evolution of influenza A virus
In: Proceedings of the Royal Society / B, Biological Sciences [278], 2249-2256
Journal Article
2009McHardy, Alice
Adams, Ben
The role of genomics in tracking the evolution of influenza A virus
In: PLOS Pathogens [5], e1000566:1-e1000566:6
Journal Article
2009Adams, Ben
McHardy, Alice
[Lundegaard, C.]
Lengauer, Thomas
Viral Bioinformatics
In: Modern Genome Annotation : the Biosapiens Network, 429-452
Part of a Book
1
Hide details for Affourtit, JasonAffourtit, Jason
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
[Yatsunenko, Tanya]
[Niazi, Faheem]
[Affourtit, Jason]
[Egholm, Michael]
[Henrissat, Bernhard]
[Knight, Rob]
[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
Journal Article
1
Hide details for Akerkar, RajendraAkerkar, Rajendra
2008Patil, Kaustubh
[Akerkar, Rajendra]
Tackling Traveling Salesman Problem with Random Key Genetic Algorithm
In: Journal of Hybrid Computing Research [1], 10-10
Journal Article
1
Hide details for Albalat, R.Albalat, R.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Alici, AyselAlici, Aysel
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
2
Hide details for Almeida, SAlmeida, S
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
Journal Article
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
Journal Article
1
Hide details for Altmeyer, MatthiasAltmeyer, Matthias
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
2
Hide details for Alves, HAlves, H
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
Journal Article
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
Journal Article
1
Hide details for Azumi, K.Azumi, K.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
4
Hide details for Barry, K.Barry, K.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
[McSweeney, C. S.]
McHardy, Alice
[Morrison, M.]
Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
Journal Article
2010[Pope, P. B.]
[Denman, S. E.]
[Jones, M.]
[Tringe, S. G.]
[Barry, K.]
[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
1
Hide details for Bartels, DanielaBartels, Daniela
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Bartels, D.Bartels, D.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Bekel, ThomasBekel, Thomas
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Bekel, T.Bekel, T.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Benito-Gutiérrez, E.Benito-Gutiérrez, E.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Beyer, StefanBeyer, Stefan
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Blöcker, HelmutBlöcker, Helmut
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Blom, JochenBlom, Jochen
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
[Müller, Tobias]
[Goesmann, Alexander]
[Joseph, Biju]
Konietzny, Sebastian
[Kurzai, Oliver]
[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
Journal Article
1
Hide details for Blow, M. J.Blow, M. J.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Bode, EdnaBode, Edna
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Bode, HelgeBode, Helge
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Bolten, ChristophBolten, Christoph
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Brandt, PetraBrandt, Petra
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
[Müller, Tobias]
[Goesmann, Alexander]
[Joseph, Biju]
Konietzny, Sebastian
[Kurzai, Oliver]
[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
Journal Article
2
Hide details for Brazdil, PBrazdil, P
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
Journal Article
2007[Vieira, J]
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Patil, Kaustubh
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[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
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1
Hide details for Bronner-Fraser, M.Bronner-Fraser, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Bruce, D. C.Bruce, D. C.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
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[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
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1
Hide details for Brunet, F.Brunet, F.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Burger, A.Burger, A.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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McHardy, Alice
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The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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1
Hide details for Butts, T.Butts, T.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
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[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
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[Schubert, M.]
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[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Candiani, S.Candiani, S.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
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[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Caporaso, J. GregoryCaporaso, J. Gregory
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
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McHardy, Alice C.
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[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
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2
Hide details for Cardoso, CSCardoso, CS
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
Journal Article
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
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1
Hide details for Cayouette, M.Cayouette, M.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Chang, C.Chang, C.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Chaplin, PaulChaplin, Paul
2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
[Goesmann, Alexander]
[Howley, Paul]
[Chaplin, Paul]
[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
Journal Article
1
Hide details for Cheng, J.-F.Cheng, J.-F.
2010[Pope, P. B.]
[Denman, S. E.]
[Jones, M.]
[Tringe, S. G.]
[Barry, K.]
[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
1
Hide details for Chen, Chia-LungChen, Chia-Lung
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
Journal Article
1
Hide details for Chistoserdova, L.Chistoserdova, L.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
1
Hide details for Choudhuri, JomunaChoudhuri, Jomuna
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Claus, HeikeClaus, Heike
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
[Müller, Tobias]
[Goesmann, Alexander]
[Joseph, Biju]
Konietzny, Sebastian
[Kurzai, Oliver]
[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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1
Hide details for Copeland, AlexCopeland, Alex
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
Journal Article
1
Hide details for Copeland, A. C.Copeland, A. C.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
2
Hide details for Cruz, ECruz, E
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
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2007[Vieira, J]
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Patil, Kaustubh
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[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
Journal Article
1
Hide details for Dalevi, D.Dalevi, D.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
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[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for de Bruijn, Frans J. (ed.)de Bruijn, Frans J. (ed.)
2011McHardy, Alice
Patil, Kaustubh R.
Phylogenetic binning of metagenome sequence samples
In: Handbook of molecular microbial ecology. - Vol. 1, Metagenomics and complementary approaches, 353-358
Part of a Book
1
Hide details for de Jong, P. J.de Jong, P. J.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
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[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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2
Hide details for Denman, S. E.Denman, S. E.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
[McSweeney, C. S.]
McHardy, Alice
[Morrison, M.]
Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
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2010[Pope, P. B.]
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McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
1
Hide details for Dietz, LauraDietz, Laura
2011Konietzny, Sebastian G.A.
[Dietz, Laura]
McHardy, Alice
Inferring functional modules of protein families with probabilistic topic models
In: BMC Bioinformatics [12], 141
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1
Hide details for Dishaw, L. J.Dishaw, L. J.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Djordjevic, G.Djordjevic, G.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Doss, SabrinaDoss, Sabrina
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Egholm, MichaelEgholm, Michael
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
[Yatsunenko, Tanya]
[Niazi, Faheem]
[Affourtit, Jason]
[Egholm, Michael]
[Henrissat, Bernhard]
[Knight, Rob]
[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
Journal Article
1
Hide details for Eichenlaub, R.Eichenlaub, R.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Eijsink, Vincent G.H.Eijsink, Vincent G.H.
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
[Smith, Wendy]
[Sundset, Monica A.]
McHardy, Alice C.
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[Eijsink, Vincent G.H.]
Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
1
Hide details for Elnakady, YasserElnakady, Yasser
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Engemann, J.Engemann, J.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Faith, Jeremiah J.Faith, Jeremiah J.
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
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[Niazi, Faheem]
[Affourtit, Jason]
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[Henrissat, Bernhard]
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[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
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1
Hide details for Ferrier, D. E.Ferrier, D. E.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Field, DawnField, Dawn
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
[Temperton, Ben]
[Huse, Susan]
McHardy, Alice C.
[Knight, Rob]
[Joint, Ian]
[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
Journal Article
1
Hide details for Flügel, M.Flügel, M.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Frank, BettinaFrank, Bettina
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
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[Gross, Frank]
[Jelsbak, Lars]
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[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
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[Welch, Roy D.]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Friedrich, TorbenFriedrich, Torben
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
[Müller, Tobias]
[Goesmann, Alexander]
[Joseph, Biju]
Konietzny, Sebastian
[Kurzai, Oliver]
[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
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Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
Journal Article
1
Hide details for Frishman, Dmitrij (ed.)Frishman, Dmitrij (ed.)
2009Adams, Ben
McHardy, Alice
[Lundegaard, C.]
Lengauer, Thomas
Viral Bioinformatics
In: Modern Genome Annotation : the Biosapiens Network, 429-452
Part of a Book
1
Hide details for Frosch, MatthiasFrosch, Matthias
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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[Joseph, Biju]
Konietzny, Sebastian
[Kurzai, Oliver]
[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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1
Hide details for Fuhrman, Jed A.Fuhrman, Jed A.
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
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McHardy, Alice C.
[Knight, Rob]
[Joint, Ian]
[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
Journal Article
1
Hide details for Gaigalat, LarsGaigalat, Lars
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Bekel, Thomas]
[Beyer, Stefan]
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[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
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[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
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[Schuster, Stephan C.]
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[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
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[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Gaigalat, L.Gaigalat, L.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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[Krause, L.]
[Linke, B.]
McHardy, Alice
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[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Garcia-Fernàndez, J.Garcia-Fernàndez, J.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
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McHardy, Alice
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[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Gartemann, K. H.Gartemann, K. H.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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McHardy, Alice
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The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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Hide details for Gartner, AGartner, A
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
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A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
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Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
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Hide details for Gerth, KlausGerth, Klaus
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
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[Alici, Aysel]
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Konietzny, Sebastian
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[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
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McHardy, Alice
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[Pradella, Silke]
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[Sasse, Florenz]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Ghassemian, M.Ghassemian, M.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
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[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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Hide details for Gibson-Brown, J. J.Gibson-Brown, J. J.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Kobayashi, M.]
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McHardy, Alice
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[Pennacchio, L. A.]
[Pestarino, M.]
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[Schubert, M.]
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[Takatori, N.]
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[Yoshizaki, F.]
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[Zhang, Q.]
[Zmasek, C. M.]
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[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Gilbert, Jack A.Gilbert, Jack A.
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
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McHardy, Alice C.
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[Joint, Ian]
[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
Journal Article
1
Hide details for Gissi, C.Gissi, C.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Litman, G. W.]
McHardy, Alice
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[Zhang, Q.]
[Zmasek, C. M.]
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Godzik, A.Godzik, A.
2008[Holland, L. Z.]
[Albalat, R.]
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[Blow, M. J.]
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McHardy, Alice
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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3
Hide details for Goesmann, AlexanderGoesmann, Alexander
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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Konietzny, Sebastian
[Kurzai, Oliver]
[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
[Goesmann, Alexander]
[Howley, Paul]
[Chaplin, Paul]
[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
Journal Article
1
Hide details for Goesmann, A.Goesmann, A.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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[Goesmann, A.]
[Gräfen, I.]
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[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Goltsman, E.Goltsman, E.
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
1
Hide details for Gordon, Jeffrey I.Gordon, Jeffrey I.
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
[Yatsunenko, Tanya]
[Niazi, Faheem]
[Affourtit, Jason]
[Egholm, Michael]
[Henrissat, Bernhard]
[Knight, Rob]
[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
Journal Article
1
Hide details for Gräfen, I.Gräfen, I.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Green, B. D.Green, B. D.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Gregor, IvanGregor, Ivan
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
[Smith, Wendy]
[Sundset, Monica A.]
McHardy, Alice C.
[Morrison, Mark]
[Eijsink, Vincent G.H.]
Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
1
Hide details for Grigoriev, I.Grigoriev, I.
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
1
Hide details for Grigoriev, I. V.Grigoriev, I. V.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
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[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
1
Hide details for Groeger, CarolinGroeger, Carolin
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Gross, FrankGross, Frank
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
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[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
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[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Haider, PeterHaider, Peter
2011Patil, Kaustubh R.
[Haider, Peter]
[Pope, Philip B.]
[Turnbaugh, Peter J.]
[Morrison, Mark]
[Scheffer, Tobias]
McHardy, Alice
Taxonomic metagenome sequence assignment with structured output models
In: Nature Methods [8], 191-192
Journal Article
1
Hide details for Hallböök, F.Hallböök, F.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Hallböök, F.]
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[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
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[Shiina, T.]
[Takatori, N.]
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[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Hausmann, JürgenHausmann, Jürgen
2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
[Goesmann, Alexander]
[Howley, Paul]
[Chaplin, Paul]
[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
Journal Article
1
Hide details for Henrissat, BernhardHenrissat, Bernhard
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
[Yatsunenko, Tanya]
[Niazi, Faheem]
[Affourtit, Jason]
[Egholm, Michael]
[Henrissat, Bernhard]
[Knight, Rob]
[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
Journal Article
1
Hide details for Hernández, M.Hernández, M.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Hirose, D.Hirose, D.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
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[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Holland, L. Z.Holland, L. Z.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Holland, P. W.Holland, P. W.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Hosomichi, K.Hosomichi, K.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Howley, PaulHowley, Paul
2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
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[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
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1
Hide details for Hugenholtz, PhilipHugenholtz, Philip
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
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[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
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5
Hide details for Hugenholtz, P.Hugenholtz, P.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
[McSweeney, C. S.]
McHardy, Alice
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Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
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2010[Pope, P. B.]
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[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
2007McHardy, Alice
[Martin, H. G.]
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[Hugenholtz, P.]
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Accurate phylogenetic classification of variable-length DNA fragments.
In: Nature Methods [4], 63-72
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2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
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1
Hide details for Huse, SusanHuse, Susan
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
[Temperton, Ben]
[Huse, Susan]
McHardy, Alice C.
[Knight, Rob]
[Joint, Ian]
[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
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1
Hide details for Ikuta, T.Ikuta, T.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Inoko, H.Inoko, H.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
3
Hide details for Ivanova, N.Ivanova, N.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
1
Hide details for Jayaraman, V. K.Jayaraman, V. K.
2008Patil, Kaustubh
[Shelokar, P. S.]
[Jayaraman, V. K.]
[Kulkarni, B. D.]
Ant Colony Optimization in the Direct Ordering Gene Expression Data
In: Journal of Hybrid Computing Research [1], 10-10
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1
Hide details for Jelsbak, LarsJelsbak, Lars
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
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[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Jelsbak, LotteJelsbak, Lotte
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Joint, IanJoint, Ian
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
[Temperton, Ben]
[Huse, Susan]
McHardy, Alice C.
[Knight, Rob]
[Joint, Ian]
[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
Journal Article
1
Hide details for Jones, M.Jones, M.
2010[Pope, P. B.]
[Denman, S. E.]
[Jones, M.]
[Tringe, S. G.]
[Barry, K.]
[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
1
Hide details for Joseph, BijuJoseph, Biju
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
[Müller, Tobias]
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Konietzny, Sebastian
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[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
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Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
Journal Article
1
Hide details for Kaiser, OlafKaiser, Olaf
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Kaiser, O.Kaiser, O.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Kalinowski, JörnKalinowski, Jörn
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Kalinowski, J.Kalinowski, J.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Kalyuzhnaya, M. G.Kalyuzhnaya, M. G.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
1
Hide details for Kasahara, M.Kasahara, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Kasamatsu, J.Kasamatsu, J.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Kaup, O.Kaup, O.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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[Gräfen, I.]
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[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
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[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
1
Hide details for Kawashima, T.Kawashima, T.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
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[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
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[Takatori, N.]
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[Yoshizaki, F.]
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[Zhang, Q.]
[Zmasek, C. M.]
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Kegler, CarstenKegler, Carsten
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Beyer, Stefan]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
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[Kalinowski, Jörn]
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Konietzny, Sebastian
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[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
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[Perez, Juana]
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[Sasse, Florenz]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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Hide details for Keith, Jonathan M. (ed.)Keith, Jonathan M. (ed.)
2008McHardy, AliceFinding genes in genome sequence
In: Bioinformatics. - Vol. 1, Data, Sequence Analysis and Evolution, 163-77
In: Methods in Molecular Biology [452], 163-77
Part of a Book
1
Hide details for Kimura, A.Kimura, A.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Garcia-Fernàndez, J.]
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McHardy, Alice
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[Osoegawa, K.]
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[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Kirchner, O.Kirchner, O.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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McHardy, Alice
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The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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1
Hide details for Kirton, E.Kirton, E.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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1
Hide details for Knauber, TinaKnauber, Tina
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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Konietzny, Sebastian
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McHardy, Alice
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
2
Hide details for Knight, RobKnight, Rob
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
[Temperton, Ben]
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Defining seasonal marine microbial community dynamics
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Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
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1
Hide details for Kobayashi, M.Kobayashi, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
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Hide details for Konietzny, SebastianKonietzny, Sebastian
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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Konietzny, Sebastian
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Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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Konietzny, Sebastian
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McHardy, Alice
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[Muñoz-Dorado, Jose]
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Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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2007[Meisinger-Henschel, Christine]
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Konietzny, Sebastian
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Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
Journal Article
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Hide details for Konietzny, Sebastian G.A.Konietzny, Sebastian G.A.
2011Konietzny, Sebastian G.A.
[Dietz, Laura]
McHardy, Alice
Inferring functional modules of protein families with probabilistic topic models
In: BMC Bioinformatics [12], 141
Journal Article
1
Hide details for Kopp, MarenKopp, Maren
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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Konietzny, Sebastian
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[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
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McHardy, Alice
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[Muñoz-Dorado, Jose]
[Perez, Juana]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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Hide details for Korzeniewski, F.Korzeniewski, F.
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
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McHardy, Alice
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Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
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1
Hide details for Kozmik, Z.Kozmik, Z.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
2
Hide details for Krause, LutzKrause, Lutz
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Choudhuri, Jomuna]
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[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
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[Wittmann, Christoph]
[Blöcker, Helmut]
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[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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2007[Meisinger-Henschel, Christine]
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[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
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[Howley, Paul]
[Chaplin, Paul]
[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
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2
Hide details for Krause, L.Krause, L.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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2007McHardy, Alice
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[Puhler, A.]
[Stoye, J.]
[Meyer, F.]
GISMO - prokaryotic gene identification using a support vector machine for ORF classification.
In: Nucleic Acids Research [32], 540-549
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1
Hide details for Krug, DanielKrug, Daniel
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
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[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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1
Hide details for Kubokawa, K.Kubokawa, K.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
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[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
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[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
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[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Kulkarni, AbhijitKulkarni, Abhijit
2007Patil, Kaustubh
[Kulkarni, Abhijit]
A simple visualization technique to understand the system dynamics in bioreactors
In: Biotechnology Progress [23], 1101-1105
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Hide details for Kulkarni, B. D.Kulkarni, B. D.
2008Patil, Kaustubh
[Shelokar, P. S.]
[Jayaraman, V. K.]
[Kulkarni, B. D.]
Ant Colony Optimization in the Direct Ordering Gene Expression Data
In: Journal of Hybrid Computing Research [1], 10-10
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Hide details for Kunin, V.Kunin, V.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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McHardy, Alice
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[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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1
Hide details for Kurzai, OliverKurzai, Oliver
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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Konietzny, Sebastian
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Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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1
Hide details for Kyrpides, Nikos C.Kyrpides, Nikos C.
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
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McHardy, Alice
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[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
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Hide details for Kyrpides, N. C.Kyrpides, N. C.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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McHardy, Alice
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[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
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Hide details for Lacerda, RLacerda, R
2007[Vieira, J]
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Patil, Kaustubh
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A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
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Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
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Hide details for Land, M.Land, M.
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
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[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
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Hide details for Lapidus, A.Lapidus, A.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
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High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
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McHardy, Alice
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[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
1
Hide details for Laudet, V.Laudet, V.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
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[Saiga, H.]
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[Schubert, M.]
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[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
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[Yoshizaki, F.]
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[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
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[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Leadbetter, J. R.Leadbetter, J. R.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Lengauer, ThomasLengauer, Thomas
2009Adams, Ben
McHardy, Alice
[Lundegaard, C.]
Lengauer, Thomas
Viral Bioinformatics
In: Modern Genome Annotation : the Biosapiens Network, 429-452
Part of a Book
1
Hide details for Levine, S. R.Levine, S. R.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
1
Hide details for Lidstrom, M. E.Lidstrom, M. E.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
1
Hide details for Linke, BukhardLinke, Bukhard
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
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[Welch, Roy D.]
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[Wittmann, Christoph]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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2
Hide details for Linke, BurkhardLinke, Burkhard
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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[Joseph, Biju]
Konietzny, Sebastian
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[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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2007[Meisinger-Henschel, Christine]
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[Lukassen, Susanne]
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[Krause, Lutz]
Konietzny, Sebastian
[Goesmann, Alexander]
[Howley, Paul]
[Chaplin, Paul]
[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
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1
Hide details for Linke, B.Linke, B.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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[Goesmann, A.]
[Gräfen, I.]
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[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
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[Pühler, A.]
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The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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1
Hide details for Litman, G. W.Litman, G. W.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
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[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Liu, Wen-TsoLiu, Wen-Tso
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
Journal Article
1
Hide details for Luginbühl, P.Luginbühl, P.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Lukassen, SusanneLukassen, Susanne
2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
[Goesmann, Alexander]
[Howley, Paul]
[Chaplin, Paul]
[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
Journal Article
1
Hide details for Lundegaard, C.Lundegaard, C.
2009Adams, Ben
McHardy, Alice
[Lundegaard, C.]
Lengauer, Thomas
Viral Bioinformatics
In: Modern Genome Annotation : the Biosapiens Network, 429-452
Part of a Book
1
Hide details for Lykidis, AthanasiosLykidis, Athanasios
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
Journal Article
1
Hide details for Macarie, HervéMacarie, Hervé
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
Journal Article
1
Hide details for Mackenzie, Alasdair K.Mackenzie, Alasdair K.
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
[Smith, Wendy]
[Sundset, Monica A.]
McHardy, Alice C.
[Morrison, Mark]
[Eijsink, Vincent G.H.]
Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
1
Hide details for Madejska, J.Madejska, J.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Mahmud, TaifoMahmud, Taifo
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Malfatti, S. A.Malfatti, S. A.
2010[Pope, P. B.]
[Denman, S. E.]
[Jones, M.]
[Tringe, S. G.]
[Barry, K.]
[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
1
Hide details for Markowitz, V. M.Markowitz, V. M.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
1
Hide details for Martinez-Arias, RosaMartinez-Arias, Rosa
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
2
Hide details for Martin, H. G.Martin, H. G.
2007McHardy, Alice
[Martin, H. G.]
[Tsirigos, A.]
[Hugenholtz, P.]
[Rigoutsos, I.]
Accurate phylogenetic classification of variable-length DNA fragments.
In: Nature Methods [4], 63-72
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2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
2
Hide details for Mascarenhas, CMascarenhas, C
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
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2007[Vieira, J]
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Patil, Kaustubh
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[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
Journal Article
1
Hide details for Mathur, E. J.Mathur, E. J.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Matson, E. G.Matson, E. G.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Mavromatis, K.Mavromatis, K.
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
23
Hide details for McHardy, AliceMcHardy, Alice
2011Konietzny, Sebastian G.A.
[Dietz, Laura]
McHardy, Alice
Inferring functional modules of protein families with probabilistic topic models
In: BMC Bioinformatics [12], 141
Journal Article
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
[McSweeney, C. S.]
McHardy, Alice
[Morrison, M.]
Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
Journal Article
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
Journal Article
2011McHardy, Alice
Patil, Kaustubh R.
Phylogenetic binning of metagenome sequence samples
In: Handbook of molecular microbial ecology. - Vol. 1, Metagenomics and complementary approaches, 353-358
Part of a Book
2011Patil, Kaustubh R.
[Haider, Peter]
[Pope, Philip B.]
[Turnbaugh, Peter J.]
[Morrison, Mark]
[Scheffer, Tobias]
McHardy, Alice
Taxonomic metagenome sequence assignment with structured output models
In: Nature Methods [8], 191-192
Journal Article
2011[Adams, Ben]
McHardy, Alice
The impact of seasonal and year-round transmission regimes on the evolution of influenza A virus
In: Proceedings of the Royal Society / B, Biological Sciences [278], 2249-2256
Journal Article
2010[Pope, P. B.]
[Denman, S. E.]
[Jones, M.]
[Tringe, S. G.]
[Barry, K.]
[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
2010Steinbrück, Lars
McHardy, Alice
Allele dynamics plots for the study of evolutionary dynamics in viral populations
In: Nucleic Acids Research [39], 1-12
Electronic Journal Article
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
[Yatsunenko, Tanya]
[Niazi, Faheem]
[Affourtit, Jason]
[Egholm, Michael]
[Henrissat, Bernhard]
[Knight, Rob]
[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
Journal Article
2009McHardy, Alice
Patil, Kaustubh
Informatik für die Metagenomforschung: Einblicke in die Welt der unkultivierbaren Mikroorganismen
In: Tätigkeitsberichte 2009 der Institute, 1-6
Part of a Book
2009McHardy, Alice
Adams, Ben
The role of genomics in tracking the evolution of influenza A virus
In: PLOS Pathogens [5], e1000566:1-e1000566:6
Journal Article
2009Adams, Ben
McHardy, Alice
[Lundegaard, C.]
Lengauer, Thomas
Viral Bioinformatics
In: Modern Genome Annotation : the Biosapiens Network, 429-452
Part of a Book
2008McHardy, AliceFinding genes in genome sequence
In: Bioinformatics. - Vol. 1, Data, Sequence Analysis and Evolution, 163-77
In: Methods in Molecular Biology [452], 163-77
Part of a Book
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
2008McHardy, Alice
Steinbrück, Lars
Method and system for building a phylogeny from genetic sequences and using the same for recommendation of vaccine strain candidates for the influenza virusMiscellaneous
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
2007McHardy, Alice
[Martin, H. G.]
[Tsirigos, A.]
[Hugenholtz, P.]
[Rigoutsos, I.]
Accurate phylogenetic classification of variable-length DNA fragments.
In: Nature Methods [4], 63-72
Journal Article
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
2007McHardy, Alice
[Krause, L.]
[Nattkemper, T. W.]
[Puhler, A.]
[Stoye, J.]
[Meyer, F.]
GISMO - prokaryotic gene identification using a support vector machine for ORF classification.
In: Nucleic Acids Research [32], 540-549
Journal Article
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
2007McHardy, Alice
[Rigoutsos, I.]
What's in the mix? Methods for the phylogenetic classification of metagenome sequence samples.
In: Current Opinion in Microbiology [10], 499-503
Journal Article
3
Hide details for McHardy, Alice CarolynMcHardy, Alice Carolyn
2012Tusche, Christina
Steinbrück, Lars
McHardy, Alice Carolyn
Detecting Patches of Protein Sites of Influenza A Viruses under Positive Selection
In: Molecular Biology and Evolution [29], 2063-2071
Journal Article
2012Steinbrück, Lars
McHardy, Alice Carolyn
Inference of Genotype–Phenotype Relationships in the Antigenic Evolution of Human Influenza A (H3N2) Viruses
In: PLoS Computational Biology [8], e1002492,1-e1002492,9
Electronic Journal Article
2012Patil, Kaustubh Raosaheb
Roune, Linus
McHardy, Alice Carolyn
The PhyloPythiaS Web Server for Taxonomic Assignment of Metagenome Sequences
In: PLoS ONE [7], e38581,1-e38581,9
Electronic Journal Article
2
Hide details for McHardy, Alice C.McHardy, Alice C.
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
[Temperton, Ben]
[Huse, Susan]
McHardy, Alice C.
[Knight, Rob]
[Joint, Ian]
[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
Journal Article
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
[Smith, Wendy]
[Sundset, Monica A.]
McHardy, Alice C.
[Morrison, Mark]
[Eijsink, Vincent G.H.]
Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
2
Hide details for McSweeney, C. S.McSweeney, C. S.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
[McSweeney, C. S.]
McHardy, Alice
[Morrison, M.]
Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
Journal Article
2010[Pope, P. B.]
[Denman, S. E.]
[Jones, M.]
[Tringe, S. G.]
[Barry, K.]
[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
1
Hide details for Meisinger-Henschel, ChristineMeisinger-Henschel, Christine
2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
[Goesmann, Alexander]
[Howley, Paul]
[Chaplin, Paul]
[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
Journal Article
1
Hide details for Merai, MichelleMerai, Michelle
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Meulemans, D.Meulemans, D.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
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[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
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[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
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[Satake, M.]
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[Schubert, M.]
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[Takatori, N.]
[Tello, J.]
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[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Meyer, FolkerMeyer, Folker
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
2
Hide details for Meyer, F.Meyer, F.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
[Gaigalat, L.]
[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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2007McHardy, Alice
[Krause, L.]
[Nattkemper, T. W.]
[Puhler, A.]
[Stoye, J.]
[Meyer, F.]
GISMO - prokaryotic gene identification using a support vector machine for ORF classification.
In: Nucleic Acids Research [32], 540-549
Journal Article
1
Hide details for Mikhailova, N.Mikhailova, N.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Monroy, OscarMonroy, Oscar
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
Journal Article
1
Hide details for Mormann, SaschaMormann, Sascha
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
2
Hide details for Morrison, MarkMorrison, Mark
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
[Smith, Wendy]
[Sundset, Monica A.]
McHardy, Alice C.
[Morrison, Mark]
[Eijsink, Vincent G.H.]
Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
2011Patil, Kaustubh R.
[Haider, Peter]
[Pope, Philip B.]
[Turnbaugh, Peter J.]
[Morrison, Mark]
[Scheffer, Tobias]
McHardy, Alice
Taxonomic metagenome sequence assignment with structured output models
In: Nature Methods [8], 191-192
Journal Article
2
Hide details for Morrison, M.Morrison, M.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
[McSweeney, C. S.]
McHardy, Alice
[Morrison, M.]
Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
Journal Article
2010[Pope, P. B.]
[Denman, S. E.]
[Jones, M.]
[Tringe, S. G.]
[Barry, K.]
[Malfatti, S. A.]
McHardy, Alice
[Cheng, J.-F.]
[Hugenholtz, P.]
[McSweeney, C. S.]
[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
Journal Article
1
Hide details for Müller, RolfMüller, Rolf
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Müller, TobiasMüller, Tobias
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
[Müller, Tobias]
[Goesmann, Alexander]
[Joseph, Biju]
Konietzny, Sebastian
[Kurzai, Oliver]
[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
Journal Article
1
Hide details for Muñoz-Dorado, JoseMuñoz-Dorado, Jose
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Murillo, C.Murillo, C.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Nattkemper, T. W.Nattkemper, T. W.
2007McHardy, Alice
[Krause, L.]
[Nattkemper, T. W.]
[Puhler, A.]
[Stoye, J.]
[Meyer, F.]
GISMO - prokaryotic gene identification using a support vector machine for ORF classification.
In: Nucleic Acids Research [32], 540-549
Journal Article
1
Hide details for Niazi, FaheemNiazi, Faheem
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
[Yatsunenko, Tanya]
[Niazi, Faheem]
[Affourtit, Jason]
[Egholm, Michael]
[Henrissat, Bernhard]
[Knight, Rob]
[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
Journal Article
1
Hide details for Nonaka, M.Nonaka, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Olinski, R. P.Olinski, R. P.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Olmos, AlejandroOlmos, Alejandro
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
[Kyrpides, Nikos C.]
[Hugenholtz, Philip]
[Macarie, Hervé]
[Olmos, Alejandro]
[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
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1
Hide details for Osoegawa, K.Osoegawa, K.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Ottesen, E. A.Ottesen, E. A.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Pancer, Z.Pancer, Z.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
6
Hide details for Patil, KaustubhPatil, Kaustubh
2009McHardy, Alice
Patil, Kaustubh
Informatik für die Metagenomforschung: Einblicke in die Welt der unkultivierbaren Mikroorganismen
In: Tätigkeitsberichte 2009 der Institute, 1-6
Part of a Book
2008Patil, Kaustubh
[Shelokar, P. S.]
[Jayaraman, V. K.]
[Kulkarni, B. D.]
Ant Colony Optimization in the Direct Ordering Gene Expression Data
In: Journal of Hybrid Computing Research [1], 10-10
Journal Article
2008Patil, Kaustubh
[Akerkar, Rajendra]
Tackling Traveling Salesman Problem with Random Key Genetic Algorithm
In: Journal of Hybrid Computing Research [1], 10-10
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2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
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[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
Journal Article
2007Patil, Kaustubh
[Kulkarni, Abhijit]
A simple visualization technique to understand the system dynamics in bioreactors
In: Biotechnology Progress [23], 1101-1105
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2007[Vieira, J]
[Cardoso, CS]
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Patil, Kaustubh
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[Almeida, S]
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[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
Journal Article
1
Hide details for Patil, Kaustubh RaosahebPatil, Kaustubh Raosaheb
2012Patil, Kaustubh Raosaheb
Roune, Linus
McHardy, Alice Carolyn
The PhyloPythiaS Web Server for Taxonomic Assignment of Metagenome Sequences
In: PLoS ONE [7], e38581,1-e38581,9
Electronic Journal Article
2
Hide details for Patil, Kaustubh R.Patil, Kaustubh R.
2011McHardy, Alice
Patil, Kaustubh R.
Phylogenetic binning of metagenome sequence samples
In: Handbook of molecular microbial ecology. - Vol. 1, Metagenomics and complementary approaches, 353-358
Part of a Book
2011Patil, Kaustubh R.
[Haider, Peter]
[Pope, Philip B.]
[Turnbaugh, Peter J.]
[Morrison, Mark]
[Scheffer, Tobias]
McHardy, Alice
Taxonomic metagenome sequence assignment with structured output models
In: Nature Methods [8], 191-192
Journal Article
1
Hide details for Pennacchio, L. A.Pennacchio, L. A.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Perez, JuanaPerez, Juana
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
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[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Perlova, OlenaPerlova, Olena
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Pestarino, M.Pestarino, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
2
Hide details for Pinto, JPPinto, JP
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
Journal Article
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
[Lacerda, R]
[Gartner, A]
[Almeida, S]
[Alves, H]
[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
Journal Article
1
Hide details for Platt, D.Platt, D.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Podar, M.Podar, M.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Pohle, S.Pohle, S.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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[Goesmann, A.]
[Gräfen, I.]
[Kalinowski, J.]
[Kaup, O.]
[Kirchner, O.]
[Krause, L.]
[Linke, B.]
McHardy, Alice
[Meyer, F.]
[Pohle, S.]
[Rückert, C.]
[Schneiker, S.]
[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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1
Hide details for Pope, Philip B.Pope, Philip B.
2011Patil, Kaustubh R.
[Haider, Peter]
[Pope, Philip B.]
[Turnbaugh, Peter J.]
[Morrison, Mark]
[Scheffer, Tobias]
McHardy, Alice
Taxonomic metagenome sequence assignment with structured output models
In: Nature Methods [8], 191-192
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1
Hide details for Pope, Phillip B.Pope, Phillip B.
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
[Smith, Wendy]
[Sundset, Monica A.]
McHardy, Alice C.
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[Eijsink, Vincent G.H.]
Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
2
Hide details for Pope, P. B.Pope, P. B.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
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McHardy, Alice
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Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
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2010[Pope, P. B.]
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McHardy, Alice
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[Hugenholtz, P.]
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[Morrison, M.]
Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
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2
Hide details for Porto, GPorto, G
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
[Brazdil, P]
[Cruz, E]
[Mascarenhas, C]
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A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
In: International Journal of Immunogenetics [34], 359-367
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2007[Vieira, J]
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Patil, Kaustubh
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[Porto, G]
Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
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1
Hide details for Pradella, SilkePradella, Silke
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Beyer, Stefan]
[Bode, Edna]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
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[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
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[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
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[Rachid, Shwan]
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[Schuster, Stephan C.]
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[Weissman, Kira J.]
[Welch, Roy D.]
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[Whitworth, David E.]
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[Wittmann, Christoph]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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1
Hide details for Pühler, AlfredPühler, Alfred
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
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[Bekel, Thomas]
[Beyer, Stefan]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
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[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
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[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
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[Rosenau, Frank]
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[Sasse, Florenz]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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2
Hide details for Pühler, A.Pühler, A.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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McHardy, Alice
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[Rückert, C.]
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[Zellermann, E. M.]
[Pühler, A.]
[Eichenlaub, R.]
[Kaiser, O.]
[Bartels, D.]
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
Journal Article
2007McHardy, Alice
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[Nattkemper, T. W.]
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[Stoye, J.]
[Meyer, F.]
GISMO - prokaryotic gene identification using a support vector machine for ORF classification.
In: Nucleic Acids Research [32], 540-549
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1
Hide details for Putnam, N. H.Putnam, N. H.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Garcia-Fernàndez, J.]
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[Kobayashi, M.]
[Kozmik, Z.]
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[Laudet, V.]
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McHardy, Alice
[Meulemans, D.]
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[Olinski, R. P.]
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Quince, ChristopherQuince, Christopher
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
[Yatsunenko, Tanya]
[Niazi, Faheem]
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[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
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1
Hide details for Rachid, ShwanRachid, Shwan
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Bekel, Thomas]
[Beyer, Stefan]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
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[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
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[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
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[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Raddatz, GünterRaddatz, Günter
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Rast, J. P.Rast, J. P.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
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[Godzik, A.]
[Hallböök, F.]
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[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
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[Saiga, H.]
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[Schubert, M.]
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[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
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[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Reeder, JensReeder, Jens
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
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McHardy, Alice C.
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[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
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1
Hide details for Richardson, P.Richardson, P.
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
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[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
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1
Hide details for Richardson, P. M.Richardson, P. M.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
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[Grigoriev, I. V.]
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[Markowitz, V. M.]
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[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
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1
Hide details for Richardson, T. H.Richardson, T. H.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
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[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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6
Hide details for Rigoutsos, I.Rigoutsos, I.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
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[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
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2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
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[Blow, M. J.]
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[Butts, T.]
[Candiani, S.]
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[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
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[Hallböök, F.]
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[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
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[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
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[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
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[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
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[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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2007McHardy, Alice
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[Hugenholtz, P.]
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Accurate phylogenetic classification of variable-length DNA fragments.
In: Nature Methods [4], 63-72
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2007[Warnecke, F.]
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[Ivanova, N.]
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[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
[Rigoutsos, I.]
[Salamov, A.]
[Korzeniewski, F.]
[Land, M.]
[Lapidus, A.]
[Grigoriev, I.]
[Richardson, P.]
[Hugenholtz, P.]
[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
Journal Article
2007McHardy, Alice
[Rigoutsos, I.]
What's in the mix? Methods for the phylogenetic classification of metagenome sequence samples.
In: Current Opinion in Microbiology [10], 499-503
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1
Hide details for Robertson, D. E.Robertson, D. E.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
[Dalevi, D.]
[Madejska, J.]
[Kirton, E.]
[Platt, D.]
[Szeto, E.]
[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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1
Hide details for Robinson-Rechavi, M.Robinson-Rechavi, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Roch, G.Roch, G.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Rokhsar, D. S.Rokhsar, D. S.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Rosenau, FrankRosenau, Frank
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
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[Beyer, Stefan]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
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Konietzny, Sebastian
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[Krug, Daniel]
[Linke, Bukhard]
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McHardy, Alice
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[Raddatz, Günter]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Roune, LinusRoune, Linus
2012Patil, Kaustubh Raosaheb
Roune, Linus
McHardy, Alice Carolyn
The PhyloPythiaS Web Server for Taxonomic Assignment of Metagenome Sequences
In: PLoS ONE [7], e38581,1-e38581,9
Electronic Journal Article
1
Hide details for Rubin, E. M.Rubin, E. M.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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McHardy, Alice
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[Kirton, E.]
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[Zhang, X.]
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[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Rückert, ChristianRückert, Christian
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Choudhuri, Jomuna]
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[Elnakady, Yasser]
[Frank, Bettina]
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Konietzny, Sebastian
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[Linke, Bukhard]
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McHardy, Alice
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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Hide details for Rückert, C.Rückert, C.
2008[Gartemann, K. H.]
[Abt, B.]
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The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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Hide details for Saiga, H.Saiga, H.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
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McHardy, Alice
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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Hide details for Salamov, A.Salamov, A.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
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High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
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McHardy, Alice
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[Platt, D.]
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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
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Hide details for Sasakura, Y.Sasakura, Y.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Sasse, FlorenzSasse, Florenz
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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Konietzny, Sebastian
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McHardy, Alice
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[Pühler, Alfred]
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Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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Hide details for Satake, M.Satake, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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Hide details for Satoh, N.Satoh, N.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Satou, Y.Satou, Y.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Scharfe, MarenScharfe, Maren
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
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[Schuster, Stephan C.]
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[Treuner-Lange, Anke]
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[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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1
Hide details for Scheffer, TobiasScheffer, Tobias
2011Patil, Kaustubh R.
[Haider, Peter]
[Pope, Philip B.]
[Turnbaugh, Peter J.]
[Morrison, Mark]
[Scheffer, Tobias]
McHardy, Alice
Taxonomic metagenome sequence assignment with structured output models
In: Nature Methods [8], 191-192
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1
Hide details for Schmidt, MichaelaSchmidt, Michaela
2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
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[Suter, Mark]
[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
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1
Hide details for Schmitt, CorinnaSchmitt, Corinna
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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[Joseph, Biju]
Konietzny, Sebastian
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[Linke, Burkhard]
[Vogel, Ulrich]
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Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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1
Hide details for Schneiker, SusanneSchneiker, Susanne
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
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[Bekel, Thomas]
[Beyer, Stefan]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
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[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
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[Groeger, Carolin]
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[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
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[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
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[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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1
Hide details for Schneiker, S.Schneiker, S.
2008[Gartemann, K. H.]
[Abt, B.]
[Bekel, T.]
[Burger, A.]
[Engemann, J.]
[Flügel, M.]
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McHardy, Alice
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The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
In: The Journal of Bacteriology [190], 2138-2149
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1
Hide details for Schoen, ChristophSchoen, Christoph
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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Konietzny, Sebastian
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[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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1
Hide details for Schramm-Glück, AnjaSchramm-Glück, Anja
2008[Schoen, Christoph]
[Blom, Jochen]
[Claus, Heike]
[Schramm-Glück, Anja]
[Brandt, Petra]
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Konietzny, Sebastian
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[Schmitt, Corinna]
[Friedrich, Torben]
[Linke, Burkhard]
[Vogel, Ulrich]
[Frosch, Matthias]
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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1
Hide details for Schubert, M.Schubert, M.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
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[Butts, T.]
[Candiani, S.]
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[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
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[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
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[Laudet, V.]
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McHardy, Alice
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[Olinski, R. P.]
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[Pennacchio, L. A.]
[Pestarino, M.]
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[Schubert, M.]
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[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
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[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Schuster, Stephan C.Schuster, Stephan C.
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
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[Bekel, Thomas]
[Beyer, Stefan]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
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[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
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[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
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[Mormann, Sascha]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Shapiro, H.Shapiro, H.
2007[Mavromatis, K.]
[Ivanova, N.]
[Barry, K.]
[Shapiro, H.]
[Goltsman, E.]
McHardy, Alice
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[Kyrpides, N. C.]
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
In: Nature Methods [4], 495-500
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1
Hide details for Shelokar, P. S.Shelokar, P. S.
2008Patil, Kaustubh
[Shelokar, P. S.]
[Jayaraman, V. K.]
[Kulkarni, B. D.]
Ant Colony Optimization in the Direct Ordering Gene Expression Data
In: Journal of Hybrid Computing Research [1], 10-10
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1
Hide details for Sherwood, N.Sherwood, N.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Zhang, Q.]
[Zmasek, C. M.]
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[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Shiina, T.Shiina, T.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Smith, WendySmith, Wendy
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
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[Sundset, Monica A.]
McHardy, Alice C.
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Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
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Hide details for Smith, W.Smith, W.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
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McHardy, Alice
[Morrison, M.]
Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
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1
Hide details for Somerfield, PaulSomerfield, Paul
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
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[Reeder, Jens]
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McHardy, Alice C.
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[Somerfield, Paul]
[Fuhrman, Jed A.]
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Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
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Hide details for Sorek, R.Sorek, R.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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McHardy, Alice
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[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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1
Hide details for Steele, Joshua A.Steele, Joshua A.
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
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McHardy, Alice C.
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[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
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Hide details for Stege, J. T.Stege, J. T.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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McHardy, Alice
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[Hugenholtz, P.]
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Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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Hide details for Steinbrück, LarsSteinbrück, Lars
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
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McHardy, Alice C.
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Defining seasonal marine microbial community dynamics
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2012Tusche, Christina
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Detecting Patches of Protein Sites of Influenza A Viruses under Positive Selection
In: Molecular Biology and Evolution [29], 2063-2071
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2012Steinbrück, Lars
McHardy, Alice Carolyn
Inference of Genotype–Phenotype Relationships in the Antigenic Evolution of Human Influenza A (H3N2) Viruses
In: PLoS Computational Biology [8], e1002492,1-e1002492,9
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2010Steinbrück, Lars
McHardy, Alice
Allele dynamics plots for the study of evolutionary dynamics in viral populations
In: Nucleic Acids Research [39], 1-12
Electronic Journal Article
2008McHardy, Alice
Steinbrück, Lars
Method and system for building a phylogeny from genetic sequences and using the same for recommendation of vaccine strain candidates for the influenza virusMiscellaneous
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2007McHardy, Alice
[Krause, L.]
[Nattkemper, T. W.]
[Puhler, A.]
[Stoye, J.]
[Meyer, F.]
GISMO - prokaryotic gene identification using a support vector machine for ORF classification.
In: Nucleic Acids Research [32], 540-549
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1
Hide details for Suciu, D.Suciu, D.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
Journal Article
1
Hide details for Suen, GarretSuen, Garret
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
[Bartels, Daniela]
[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
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[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
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[Whitworth, David E.]
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[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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1
Hide details for Sundset, Monica A.Sundset, Monica A.
2012[Pope, Phillip B.]
[Mackenzie, Alasdair K.]
Gregor, Ivan
[Smith, Wendy]
[Sundset, Monica A.]
McHardy, Alice C.
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[Eijsink, Vincent G.H.]
Metagenomics of the Svalbard Reindeer Rumen Microbiome Reveals Abundance of Polysaccharide Utilization Loci
In: PLoS ONE [7], e38571,1-e38571,10
Electronic Journal Article
1
Hide details for Suter, MarkSuter, Mark
2007[Meisinger-Henschel, Christine]
[Schmidt, Michaela]
[Lukassen, Susanne]
[Linke, Burkhard]
[Krause, Lutz]
Konietzny, Sebastian
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[Hausmann, Jürgen]
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara
In: Journal of General Virology [88], 3249-3259
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2
Hide details for Szeto, E.Szeto, E.
2008[Kalyuzhnaya, M. G.]
[Lapidus, A.]
[Ivanova, N.]
[Copeland, A. C.]
McHardy, Alice
[Szeto, E.]
[Salamov, A.]
[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
[Tringe, S. G.]
[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
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2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
[Stege, J. T.]
[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
[Sorek, R.]
[Tringe, S. G.]
[Podar, M.]
[Martin, H. G.]
[Kunin, V.]
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[Szeto, E.]
[Salamov, A.]
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[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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1
Hide details for Takatori, N.Takatori, N.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
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[Kobayashi, M.]
[Kozmik, Z.]
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[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
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[Olinski, R. P.]
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[Pestarino, M.]
[Rast, J. P.]
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[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Tamayo, G.Tamayo, G.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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McHardy, Alice
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[Aboushadi, N.]
[Sorek, R.]
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[Podar, M.]
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[Rigoutsos, I.]
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[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Tello, J.Tello, J.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
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[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
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[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
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[Laudet, V.]
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McHardy, Alice
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[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
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[Schubert, M.]
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[Yoshizaki, F.]
[Yu, J. K.]
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[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Temperton, BenTemperton, Ben
2012[Gilbert, Jack A.]
[Steele, Joshua A.]
[Caporaso, J. Gregory]
[Steinbrück, Lars]
[Reeder, Jens]
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McHardy, Alice C.
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[Somerfield, Paul]
[Fuhrman, Jed A.]
[Field, Dawn]
Defining seasonal marine microbial community dynamics
In: The ISME Journal [6], 298-308
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1
Hide details for Treuner-Lange, AnkeTreuner-Lange, Anke
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Choudhuri, Jomuna]
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Konietzny, Sebastian
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[Linke, Bukhard]
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McHardy, Alice
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[Perez, Juana]
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[Rachid, Shwan]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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1
Hide details for Tringe, Susannah G.Tringe, Susannah G.
2011[Lykidis, Athanasios]
[Chen, Chia-Lung]
[Tringe, Susannah G.]
McHardy, Alice
[Copeland, Alex]
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[Monroy, Oscar]
[Liu, Wen-Tso]
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
In: The ISME Journal [5], 122-130
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Hide details for Tringe, S. G.Tringe, S. G.
2011[Pope, P. B.]
[Smith, W.]
[Denman, S. E.]
[Tringe, S. G.]
[Barry, K.]
[Hugenholtz, P.]
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McHardy, Alice
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Isolation of Succinivibrionaceae Implicated in Low Methane Emissions from Tammar Wallabies
In: Science [333], 646-648
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McHardy, Alice
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Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
In: Proceedings of the National Academy of Sciences of the United States of America [107], 14793-14798
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McHardy, Alice
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[Grigoriev, I. V.]
[Suciu, D.]
[Levine, S. R.]
[Markowitz, V. M.]
[Rigoutsos, I.]
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[Bruce, D. C.]
[Richardson, P. M.]
[Lidstrom, M. E.]
[Chistoserdova, L.]
High-resolution metagenomics targets specific functional types in complex microbial communities
In: Nature Biotechnology [26], 1029-34
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2007[Warnecke, F.]
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[Ivanova, N.]
[Ghassemian, M.]
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[Cayouette, M.]
McHardy, Alice
[Djordjevic, G.]
[Aboushadi, N.]
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[Tringe, S. G.]
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[Platt, D.]
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[Salamov, A.]
[Barry, K.]
[Mikhailova, N.]
[Kyrpides, N. C.]
[Matson, E. G.]
[Ottesen, E. A.]
[Zhang, X.]
[Hernández, M.]
[Murillo, C.]
[Acosta, L. G.]
[Rigoutsos, I.]
[Tamayo, G.]
[Green, B. D.]
[Chang, C.]
[Rubin, E. M.]
[Mathur, E. J.]
[Robertson, D. E.]
[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
Journal Article
1
Hide details for Tsirigos, A.Tsirigos, A.
2007McHardy, Alice
[Martin, H. G.]
[Tsirigos, A.]
[Hugenholtz, P.]
[Rigoutsos, I.]
Accurate phylogenetic classification of variable-length DNA fragments.
In: Nature Methods [4], 63-72
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Hide details for Turnbaugh, Peter J.Turnbaugh, Peter J.
2011Patil, Kaustubh R.
[Haider, Peter]
[Pope, Philip B.]
[Turnbaugh, Peter J.]
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McHardy, Alice
Taxonomic metagenome sequence assignment with structured output models
In: Nature Methods [8], 191-192
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[Gordon, Jeffrey I.]
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
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1
Hide details for Tusche, ChristinaTusche, Christina
2012Tusche, Christina
Steinbrück, Lars
McHardy, Alice Carolyn
Detecting Patches of Protein Sites of Influenza A Viruses under Positive Selection
In: Molecular Biology and Evolution [29], 2063-2071
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1
Hide details for Valencia, Alfonso (ed.)Valencia, Alfonso (ed.)
2009Adams, Ben
McHardy, Alice
[Lundegaard, C.]
Lengauer, Thomas
Viral Bioinformatics
In: Modern Genome Annotation : the Biosapiens Network, 429-452
Part of a Book
1
Hide details for Velicer, GregoryVelicer, Gregory
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
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McHardy, Alice
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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Hide details for Vieira, JVieira, J
2007[Vieira, J]
[Cardoso, CS]
[Pinto, JP]
Patil, Kaustubh
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[Cruz, E]
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A Putative Gene Located at the MHC-CLASS I Region Around the D6S105 Marker Contributes to the Setting of CD8+ T Lymphocyte Numbers in Humans
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Location of a putative gene contributing to the setting of CD8+T lymphocytes: A modifier of hereditary hemochromatosis expression?
In: American Journal of Hematology [82], 509-509
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Hide details for Vogel, UlrichVogel, Ulrich
2008[Schoen, Christoph]
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Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
In: Proceedings of the National Academy of Sciences of the United States of America [105], 3473-3478
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Hide details for Vopalensky, P.Vopalensky, P.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
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[Xu, A.]
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[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Vorhölter, Frank-JörgVorhölter, Frank-Jörg
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
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[Kegler, Carsten]
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Konietzny, Sebastian
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[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
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1
Hide details for Wada, S.Wada, S.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
[Bronner-Fraser, M.]
[Brunet, F.]
[Butts, T.]
[Candiani, S.]
[Dishaw, L. J.]
[Ferrier, D. E.]
[Garcia-Fernàndez, J.]
[Gibson-Brown, J. J.]
[Gissi, C.]
[Godzik, A.]
[Hallböök, F.]
[Hirose, D.]
[Hosomichi, K.]
[Ikuta, T.]
[Inoko, H.]
[Kasahara, M.]
[Kasamatsu, J.]
[Kawashima, T.]
[Kimura, A.]
[Kobayashi, M.]
[Kozmik, Z.]
[Kubokawa, K.]
[Laudet, V.]
[Litman, G. W.]
McHardy, Alice
[Meulemans, D.]
[Nonaka, M.]
[Olinski, R. P.]
[Pancer, Z.]
[Pennacchio, L. A.]
[Pestarino, M.]
[Rast, J. P.]
[Rigoutsos, I.]
[Robinson-Rechavi, M.]
[Roch, G.]
[Saiga, H.]
[Sasakura, Y.]
[Satake, M.]
[Satou, Y.]
[Schubert, M.]
[Sherwood, N.]
[Shiina, T.]
[Takatori, N.]
[Tello, J.]
[Vopalensky, P.]
[Wada, S.]
[Xu, A.]
[Ye, Y.]
[Yoshida, K.]
[Yoshizaki, F.]
[Yu, J. K.]
[Zhang, Q.]
[Zmasek, C. M.]
[de Jong, P. J.]
[Osoegawa, K.]
[Putnam, N. H.]
[Rokhsar, D. S.]
[Satoh, N.]
[Holland, P. W.]
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
Journal Article
1
Hide details for Warnecke, F.Warnecke, F.
2007[Warnecke, F.]
[Luginbühl, P.]
[Ivanova, N.]
[Ghassemian, M.]
[Richardson, T. H.]
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McHardy, Alice
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[Hugenholtz, P.]
[Leadbetter, J. R.]
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
In: Nature [450], 560-565
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1
Hide details for Weissman, Kira J.Weissman, Kira J.
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
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[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
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[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
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[Kalinowski, Jörn]
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[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
[Rachid, Shwan]
[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
[Scharfe, Maren]
[Schuster, Stephan C.]
[Suen, Garret]
[Treuner-Lange, Anke]
[Velicer, Gregory]
[Vorhölter, Frank-Jörg]
[Weissman, Kira J.]
[Welch, Roy D.]
[Wenzel, Silke C.]
[Whitworth, David E.]
[Wilhelm, Susanne]
[Wittmann, Christoph]
[Blöcker, Helmut]
[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Welch, Roy D.Welch, Roy D.
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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[Bekel, Thomas]
[Beyer, Stefan]
[Bode, Edna]
[Bode, Helge]
[Bolten, Christoph]
[Choudhuri, Jomuna]
[Doss, Sabrina]
[Elnakady, Yasser]
[Frank, Bettina]
[Gaigalat, Lars]
[Goesmann, Alexander]
[Groeger, Carolin]
[Gross, Frank]
[Jelsbak, Lars]
[Jelsbak, Lotte]
[Kalinowski, Jörn]
[Kegler, Carsten]
[Knauber, Tina]
Konietzny, Sebastian
[Kopp, Maren]
[Krause, Lutz]
[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
[Martinez-Arias, Rosa]
McHardy, Alice
[Merai, Michelle]
[Meyer, Folker]
[Mormann, Sascha]
[Muñoz-Dorado, Jose]
[Perez, Juana]
[Pradella, Silke]
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[Raddatz, Günter]
[Rosenau, Frank]
[Rückert, Christian]
[Sasse, Florenz]
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[Velicer, Gregory]
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[Whitworth, David E.]
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Wenzel, Silke C.Wenzel, Silke C.
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
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Konietzny, Sebastian
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McHardy, Alice
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Whitworth, David E.Whitworth, David E.
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
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[Choudhuri, Jomuna]
[Doss, Sabrina]
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[Knauber, Tina]
Konietzny, Sebastian
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[Linke, Bukhard]
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McHardy, Alice
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[Pühler, Alfred]
[Müller, Rolf]
Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Wilhelm, SusanneWilhelm, Susanne
2007[Schneiker, Susanne]
[Perlova, Olena]
[Kaiser, Olaf]
[Gerth, Klaus]
[Alici, Aysel]
[Altmeyer, Matthias]
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Konietzny, Sebastian
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[Krug, Daniel]
[Linke, Bukhard]
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McHardy, Alice
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[Mormann, Sascha]
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[Perez, Juana]
[Pradella, Silke]
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[Raddatz, Günter]
[Rosenau, Frank]
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[Sasse, Florenz]
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[Pühler, Alfred]
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Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Wittmann, ChristophWittmann, Christoph
2007[Schneiker, Susanne]
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[Bolten, Christoph]
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[Groeger, Carolin]
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[Kegler, Carsten]
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Konietzny, Sebastian
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[Krug, Daniel]
[Linke, Bukhard]
[Mahmud, Taifo]
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McHardy, Alice
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Complete genome sequence of the myxobacterium Sorangium cellulosum.
In: Nature Biotechnology [27], 281-1289
Journal Article
1
Hide details for Xu, A.Xu, A.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
[Benito-Gutiérrez, E.]
[Blow, M. J.]
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McHardy, Alice
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[Satoh, N.]
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The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Yatsunenko, TanyaYatsunenko, Tanya
2010[Turnbaugh, Peter J.]
[Quince, Christopher]
[Faith, Jeremiah J.]
McHardy, Alice
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Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
In: Proceedings of the National Academy of Sciences of the United States of America [107], 7503-7508
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1
Hide details for Ye, Y.Ye, Y.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
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[Blow, M. J.]
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McHardy, Alice
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The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Yoshida, K.Yoshida, K.
2008[Holland, L. Z.]
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McHardy, Alice
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The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Yoshizaki, F.Yoshizaki, F.
2008[Holland, L. Z.]
[Albalat, R.]
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McHardy, Alice
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The amphioxus genome illuminates vertebrate origins and cephalochordate biology
In: Genome Research [18], 1100-1111
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1
Hide details for Yu, J. K.Yu, J. K.
2008[Holland, L. Z.]
[Albalat, R.]
[Azumi, K.]
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