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MPI-INF D3 Publications

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BibTeX cite keyAuthor/EditorYearTitleType
Lawyer2009_cerebellumLawyer, Glenn
Nesvåg, Ragnar
Varnäs, Katarina
Okugawa, Gaku
Agartz, Ingrid
2009Grey and white matter proportional relationships in the cerebellar vermis altered in schizophrenia
In: Cerebellum [8], 52-60
Journal Article
Lawyer2009_lFDRLawyer, Glenn
Ferkingstad, Egil
Nesvåg, Rangan
Varnäs, Katarina
Agartz, Ingrid
2009Local and covariate-modulated false discovery rates applied in neuroimaging
In: NeuroImage [47], 213-219
Journal Article
Lawyer2011Lawyer, Glenn
Altmann, André
Thielen, Alex
Zazzi, Maurizio
Sönnerborg, Anders
Lengauer, Thomas
2011HIV-1 mutational pathways under multidrug therapy
In: AIDS Research and Therapy [8], 1-13
Journal Article
Lawyer2012Lawyer, Glenn
Schülter, Eugen
Kaiser, Rolf
Reuter, Stefan
Oette, Mark
Lengauer, Thomas
2012Attachment IconEndogenous or exogenous spreading of HIV-1 in Nordrhein-Westfalen, Germany, investigated by phylodynamic analysis of the RESINA Study cohort
In: Medical Microbiology and Immunology [201], 259-269
Journal Article
LengAltThie2009Lengauer, Thomas
Altmann, André
Thielen, Alexander
2009Bioinformatische Unterstützung der Auswahl von HIV Therapien
In: Informatik Spektrum [32], 320-331
Journal Article
Lengauer-Genafor2007Lengauer, Oette, Selbig, Hoffmann, Poggensee, Hamouda, Häussinger, Kaiser (ed.)2007European Journal of Medical ResearchJournal
Lengauer2001aZien, Alexander
Aigner, T.
Zimmer, Ralf
Lengauer, Thomas
2001Centralization: A biologically sensible method for the normalization of gene expression data
In: Bioinformatics [17], 323S-331S
Journal Article
Lengauer2001bLengauer (ed.)2001From Genomes to DrugsBook
Lengauer2001cLengauer, Sankoff, Istrail, Pevzner, Waterman (ed.)2001Proceedings of the 5th Annual Conference on Research in Computational Molecular Biology (RECOMB2001)Book
Lengauer2001dClaussen, C.
Buning, Christian
Rarey, Matthias
Lengauer, Thomas
2001FlexE: Efficient Molecular Docking Considering Protein Structure Variations
In: Journal of Molecular Biology [308], 377-395
Journal Article
Lengauer2001eApostolakis, Joannis
Hofmann, D.
Lengauer, Thomas
2001Derivation of a scoring function for crystal structure prediction
In: Acta Crystallographica [A57], 442-450
Journal Article
Lengauer2001fBeerenwinkel, Niko
Schmidt, Barbara
Walter, Hauke
Kaiser, Rolf
Lengauer, Thomas
Hoffmann, Daniel
Korn, Klaus
Selbig, Joachim
2001Geno2pheno: A system for the interpretation of genotypic HIV Drug resistance tests
In: IEEE Intelligent Systems [16], 35-41
Journal Article
Lengauer2001gSchäfer, M.
Lengauer, Thomas
2001Automated Layout Generation and Wiring Area Estimation for 3D Electronic Modules
In: ASME Journal of Machanical Design [123], 330-336
Journal Article
Lengauer2001hLengauer, Thomas2001Bioinformatik an der Schwelle zur postgenomischen Ära
In: Was wissen wir, wenn wir das menschliche Genom kennen, 56-62
Part of a Book
Lengauer2001rLengauer, Thomas
Beerenwinkel, Niko
Schmidt, B.
Walter, H.
Kaiser, R.
Hoffmann, D.
Korn, K.
Selbig, J.
2001Geno2pheno: a new machine learning approach to predicting phenotypic drug resistance from genotype
In: Antiviral Therapy [6], 104
Journal Article
Lengauer2002aHindle, Sally A.
Rarey, Matthias
Buning, Christian
Lengauer, Thomas
2002Flexible docking under pharmacophore type constraints
In: Journal of Computer-Aided Molecular Design [16], 129-149
Journal Article
Lengauer2002bHanisch, Daniel
Zimmer, Ralf
Lengauer, Thomas
2002ProML - the Protein Markup Language for specification of protein sequences, structures and families
In: In Silico Biology [2], 313 - 324
Journal Article
Lengauer2002cFreudenberg, Jan
Zimmer, Ralf
Hanisch, Daniel
Lengauer, Thomas
2002A hypergraph-based method for unification of existing protein structure- and sequence-families
In: In Silico Biology [2], 339 - 349
Journal Article
Lengauer2002dLengauer, Thomas2002Preface: Special RECOMB 2001 Issue
In: Journal of Computational Biology [9], 147-148
Journal Article
Lengauer2002eLengauer, Thomas2002Ausbildung im Bereich Bioinformatik
In: Ernst & Young Report Biotechnologie, Segmentreport Bioinformatik [1], 57-58
Journal Article
Lengauer2002fZien, Alexander
Fluck, Juliane
Zimmer, Ralf
Lengauer, Thomas
2002Microarrays: How Many Do You Need?
In: Proceedings of the Sixth Annual Conference on Research in Computational Molecular Biology (RECOMB2002), 321-330
Proceedings Article
Lengauer2002gHanisch, Daniel
Zien, Alexander
Zimmer, Ralf
Lengauer, Thomas
2002Co-clustering of biological networks and gene expression data
In: Proceedings of the Tenth Conference on Intelligent Systems for Molecular Biology (ISMB 2002), 145-154
Proceedings Article
Lengauer2003aZien, Alexander
Fluck, Juliane
Zimmer, Ralf
Lengauer, Thomas
2003Microarrays: How many do you need?
In: Journal of Computational Biology [10], 653-667
Journal Article
Lengauer2003bLengauer, Thomas
Schäfer, M.
2003Combinatorial Optimization Techniques for Three-Dimensional Arrangement Problems
In: Mathematics - Key Technology for the Future, 63-73
Part of a Book
Lengauer2003cLengauer, Thomas2003Analyzing resistance phenomena in HIV with bioinformatics methods
In: Bioinformatics [19], 92i
Journal Article
Lengauer2004Crass, T.
Antes, Iris
Basekow, R.
Bork, P.
Buning, Christian
Christensen, M.
Claußen, H.
Ebeling, C.
Ernst,P.
Gailus-Durner, V.
Glatting, K.-H.
Gohla, R.
Gößling, F.
Grote, K.
Heidtke, K.
Herrmann, A.
O Keefe, S.
Kießlich, O.
Kolibal, S.
Korbel, J.O.
Lengauer, Thomas
Liebich, I.
van der Linden, M.
Luz, H.
Meissner, K.
von Mering, C.
Mevissen, T.
Mewes, H.-W.
Michael, H.
Mokrejs, M.
Müller, T.
Pospisil, H.
Rarey, Matthias
Reich, J.G.
Schneider, R.
Schomburg, D.
Schulze-Kremer, S.
Schwarzer, K.
Sommer, Ingolf
Springstubbe, S.
Suhai, S.
Thoppae, G.
Vingron, M.
Warfsmann, J.
Werner, T.
Wetzler, D.
Wingender, E.
Zimmer, Ralf
2004The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources
In: Bioinformatics [20], 268-270
Journal Article
Lengauer2004bÖhsen von, Niklas
Sommer, Ingolf
Zimmer, Ralf
Lengauer, Thomas
2004Arby: Automatic protein structure prediction using profile-profile alignment and confidence measures
In: Bioinformatics [20], 2228-2235
Journal Article
Lengauer2004cLengauer, Thomas
Lemmen, Christian
Rarey, Matthias
Zimmermann, M.
2004Novel technologies for virtual screening
In: Drug Discovery Today [9], 27-34
Journal Article
Lengauer2004dLengauer, Thomas2005Attachment IconInformatics (Computational Biology)
In: Growth Factors and Oncogenes in Gastrointestinal Cancers to Informatics (Computational Biology), 567-626
Part of a Book
Lengauer2004fHofmann, W.P.
Herrmann, E.
Kronenberger, B.
Merkwirth, Christian
Welsch, Christoph
Lengauer, Thomas
Zeuzem, S.
Sarrazin, C.
2004Association of HCV-related mixed cryoglobulinemia with specific mutational patterns of the HCV E2 protein and CD81 expression on peripheral B lymphocytes
In: Blood [104], 1228-1229
Journal Article
Lengauer2004gThornton, Bourne, Gilbert, Goble, Goldman, Gribskov, Hide, Higgins, Kanehisa, Lengauer, Linial, Myers, Quackenbush, Rebholz-Schuhmann, Rost, Sowdhamini, Valencia, Vingron, Xu (ed.)2004Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computional Biology 2004 (ISMB/ECCB 2004)Proceedings
lengauer2005aLengauer, Thomas
Merkwirth, Christian
2005Automatic Generation of complementary descriptors with molecular graph networks
In: Journal of Chemical Information and Modeling [45], 1159-1168
Journal Article
Lengauer2005bHessler, G.
Zimmermann, M.
Matter, H.
Evers, A.
Naumann, T.
Lengauer, Thomas
Rarey, M.
2005Multiple-Ligand-Based Virtual Screening: Methods and Applications of the MTree Approach
In: Journal of Medicinal Chemistry [48], 6575-6584
Journal Article
Lengauer2006bHeil, Burkhard
Ludwig, Jost
Lichtenberg-Fraté, Hella
Lengauer, Thomas
2006Computational recognition of potassium channel sequences
In: Bioinformatics [13], 1562-1568
Journal Article
Lengauer2006cNeumann, Dirk
Kohlbacher, Oliver
Merkwirth, Christian
Lengauer, Thomas
2006A Fully Computational Model for Predicting Percutaneous Drug Absorption
In: Journal of Chemical Information and Modeling [1], 424-429
Journal Article
Lengauer2006dSvicher, Valentina
Sing, Tobias
Santoro, Maria Mercedes
Forbici, Federica
Rodriguez- Barrios, Fátima
Bertoli, Ada
Beerenwinkel, Niko
Bellocchi, Maria Concetta
Gago, Federigo
d´Arminio Monforte, Antonella
Antinori, Andrea
Lengauer, Thomas
Ceccherini-Silberstein, Francesca
Perno, Carlo-Federico
2006Involvement of novel HIV-1 reverse transcriptase mutations in the regulation of resistance to nucleoside inhibitors
In: Journal of Virology [80], 7186-7198
Journal Article
Lengauer2006eVelagapudi, Vidya R.
Wittmann, Christoph
Lengauer, Thomas
Talwar, Priti
Heinzle, Elmar
2006Metabolic high- content screening of Saccharomyces cerevisiae reveals superior performance of single gene deletion strains
In: Process Biochemistry [41], 2170-2179
Journal Article
Lengauer2006fWelker, Martin W.
Hofmann, Wolf-Peter
Welsch, Christoph
von Wagner, Michael
Herrmann, Eva
Lengauer, Thomas
Zeuzem, Stefan
Sarrazin, Christoph
2007Correlation nonstructural (NS)4B amino acid variations with initial viral kinetics during interferon-alpha-based therapy in HCV-1b-infected patients
In: Journal of Viral Hepatitis [14], 338-349
Journal Article
Lengauer2006gLehmann, Clara
Däumer, Martin
Bousaad, Ibrahim
Sing, Tobias
Beerenwinkel, Niko
Lengauer, Thomas
Schmeisser, Norbert
Wyen, Christoph
Fätkenheuer, Gerd
Kaiser, Rolf
2006Stable coreceptor usage of HIV in patients with ongoing treatment failure on HAART
In: Journal of Clinical Virology [37], 300-304
Journal Article
Lengauer2006hNeumann, Dirk
Kohlbacher, Oliver
Merkwirth, Christian
Lengauer, Thomas
2006Prediction of percutaneous drug absorption
In: Journal of Chemical Information and Modeling [1], 424-429
Journal Article
Lengauer2007Torda, Andrew E.
Lengauer, Thomas
2006Attachment IconEditorial: Selection of papers of the German Conference of Bioinformatics (GCB) 2005
In: Bioinformatics [22], 1
Journal Article
Lengauer2007eAntes, Iris
Siu, Shirley Weng-In
Lengauer, Thomas
2006Attachment IconDynaPred: A structure and sequence based method for the prediction of MHC class I binding peptide sequence and conformations
In: Bioinformatics [22], 16-24
Journal Article
Lengauer2007gLengauer, Thomas2007Future Trends
In: Bioinformatics - From Genomes to Therapies 3. The Holy Grail: Molecular Function, 1651-1687
Part of a Book
Lengauer2007kLengauer, Thomas2007Introduction
In: Bioinformatics - From Genomes to Therapies 1. The Building Blocks: Molecular Sequences and Structures, 1-24
Part of a Book
Lengauer2007mFlockerzi, Aline
Maydt, Jochen
Frank, Oliver
Ruggieri, Alessia
Maldener, Esther
Seifarth, Wolfgang
Medstrand, Patrik
Lengauer, Thomas
Meyerhans, Andreas
Leib-Mosch, Christine
Meese, Eckart
Mayer, Jens
2007Attachment IconExpression pattern analysis of transcribed HERV sequences is complicated by ex vitvo recombination
In: Retrovirology [4], 39
Journal Article
Lengauer2007m2Lengauer, Thomas2007Bioinformatik
In: Technologiefüher - Grundlagen, Anwendungen, Trends, 4
Part of a Book
Lengauer2007nKetter, Ralf
Urbschat, Steffi
Henn, Wolfram
Feiden, Wolfgang
Beerenwinkel, Niko
Lengauer, Thomas
Steudel, Wolf-Ingo
Zang, Klaus D.
Rahnenführer, Jörg
2007Application of oncogenetic trees mixtures as a biostatistical model of the clonal cytogenetic evolution of meningiomas
In: International Journal of Cancer [121], 1473-1480
Journal Article
Lengauer2007n2Lengauer, Thomas2007Strategiekonzept "Molekulare Bioinformatik"
In: Informatikforschung in Deutschland, 9
Part of a Book
Lengauer2007oWelsch, Christoph
Albrecht, Mario
Maydt, Jochen
Herrmann, E.
Welker, M.W.
Sarrazin, C.
Scheidig, A.
Lengauer, Thomas
Zeuzem, S.
2007Structural and functional comparison of the non-structural protein 4B of flaviviridae
In: Journal of Molecular Graphics and Modeling [26], 546-557
Journal Article
Lengauer2007pKupfer, Bernd
Sing, Tobias
Schüffler, Peter
Hall, Rabea
Kurz, Ralf
McKeown, Astrid
Schneweis, Karl-Eduard
Eberl, Wolfgang
Oldenburg, Johannes
Brackmann, Hans H.
Rockstroh, Jürgen K.
Spengler, Ulrich
Däumer, Martin
Kaiser, Rolf
Lengauer, Thomas
Matz, Bertfried
2007Fifteen years of env C2V3C3 evolution in six individuals clonally infected with human immunodeficiency virus type 1
In: Journal of Medical Virology [79], 1629-1639
Journal Article
Lengauer2007qSteffen, Andreas
Thiele, Carolin
Tietze, Simon
Strassnig, Christian
Kämper, Andreas
Lengauer, Thomas
Wenz, Gerhard
Apostolakis, Joannis
2007Improved cyclodextrin-based receptors for camptothecin by inverse virtual screening
In: Chemistry [13], 6801-6809
Journal Article
Lengauer2007rCeccherini-Silberstein, Francesca
Svicher, Valentina
Sing, Tobias
Artese, Anna
Santoro, Maria Mercedes
Forbici, Federica
Bertoli, Ada
Alcaro, Stefano
Palamara, Guido
Monforte, Antonella d'Arminio
Balzarini, Jan
Antinori, Andrea
Lengauer, Thomas
Perno, Carlo Federico
2007Attachment IconCharacterization and structural analysis of novel mutations in human immunodeficiency virus type 1 reverse transcriptase involved in the regulation of restistance to nonnucleoside inhibitors
In: Journal of Virology [81], 11507-11519
Journal Article
Lengauer2007sAhlenstiel, G.
Roomp, Kirsten
Däumer, Martin
Nattermann, T.
Vogel, M.
Rockstroh, J.K.
Beerenwinkel, Niko
Kaiser, R.
Nischalke, H.-D.
Sauerbruch, T.
Lengauer, Thomas
Spengler, U.
2007Attachment IconSelective pressures of HLA genotypes and antiviral therapy on human immunodeficiency virus type 1 sequence mutation at a population level
In: Clinical and Vaccine Immunology [14], 1266-1273
Journal Article
Lengauer2007tSteffen, Andreas
Karasz, Maximilian
Thiele, Carolin
Lengauer, Thomas
Kämper, Andreas
Wenz, Gerhard
Apostolakis, Joannis
2007Combined similarity and QSPR virtual screening for guest molecules of $\beta$-cyclodextrin
In: New Journal of Chemistry [31], 1941-1949
Journal Article
Lengauer2009xAdams, Ben
McHardy, Alice
Lundegaard, C.
Lengauer, Thomas
2009Viral Bioinformatics
In: Modern Genome Annotation - The BioSapiens Network, 429-452
Part of a Book
Lengauer2010aLengauer, Thomas
Altmann, André
Thielen, Alexander
Kaiser, Rolf
2010Chasing the AIDS Virus
In: Communications of the ACM [53], 66-74
Journal Article
Lengauer2011aZazzi, M.
Kaiser, R.
Sönnerborg, A.
Struck, D
Altmann, Andre
Prosperi, M.
Rosen-Zvi, M.
Petroczi, A.
Peres, Y.
Schülter, E.
Boucher, C.A.
Brun-Vezinet, F.
Harrigan, R.
Morris, L.
Obermeier, M.
Perno, C.-F.
Phanuphak, P.
Pillay, D
Shafer, R.W.
Vandamme, A.-M.
Van Laethem, K.
Wensing, A.
Lengauer, Thomas
Incardona, F.
2011Prediction of Response to Antiretroviral Therapy by Human Experts and by the EuResist Data-Driven Expert System (the EVE study)
In: HIV Medicine [12], 211-218
Journal Article
Lengauer2011bDäumer, Martin
Kaiser, Rolf
Klein, Rolf
Lengauer, Thomas
Thiele, Bernhard
Thielen, Alexander
2011Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis
In: BMC Medical Informatics and Decision Making [11], 30,1-30,8
Electronic Journal Article
Lengauer2011cLengauer (ed.)2011Computermodelle in der Wissenschaft - zwischen Analyse, Vorhersage und SuggestionBook
lengauer2012aHeger, Eva
Thielen, Alexander
Gilles, Ramona
Obermeier, Martin
Lengauer, Thomas
Kaiser, Rolf
Trapp, Susanna
2012APOBEC3G/F a one possible driving source for co-receptor switch of the human immunodeficiency virus-1
In: Medical Microbiology and Immunology [201], 7-16
Journal Article
lengauer2012bFeuerbach, Lars
Halachev, Konstantin
Assenov, Yassen
Mueller, Fabian
Bock, Christoph
Lengauer, Thomas
2012Analyzing epigenome data in context of genome evolution and human diseases
In: Evolutionary Genomics : Statistical and Computational Methods, Volume 2, 431-467
In: Methods of Molecular Biology [856], 431-467
Part of a Book
lengauer2012cWelsch, Christoph
Shimakami, Tetsuro
Hartmann, Christoph
Yang, Yan
Domingues, Francisco S.
Lengauer, Thomas
Zeuzem, Stefan
Lemon, Stanley M.
2012Peptidomimetic Escape Mechanisms Arise via Genetic Diversity in the Ligand-Binding Site of the Hepatitis C Virus NS3/4A Serine Protease
In: Gastroenterology [142], 654-663
Journal Article
lengauer2012dBock, Christoph
Lengauer, Thomas
2012Managing drug resistance in cancer: lessons from HIV therapy
In: Nature Reviews Cancer [12], 494-501
Journal Article
lengauer2012eBozek, Katarzyna
Eckhardt, Manon
Sierra, Saleta
Kaiser, Rolf
Kräusslich, Hans-Georg
Müller, Barbara
Lengauer, Thomas
2012An expanded model of HIV cell entry phenotype based on multi-parameter single-cell data
In: Retrovirology [9], 60.1-60.15
Journal Article
lengauer2012gBozek, K.
Lengauer, Thomas
Sierra, S.
Kaiser, Rolf
Domingues, F.S.
2013Analysis of physicochemical and structural properties determining HIV-1 coreceptor usage
In: PLoS Computational Biology [x], x
Journal Article
lengauer2012vPfeifer, Nico
Lengauer, Thomas
2012Improving coreceptor usage prediction in the clinic using hints from next generation sequencing data
In: Bioinformatics [28], i589-i595
Journal Article
Lengauer2012zLengauer, Thomas2012Bioinformatical Assistance of Selecting Anti-HIV Therapies: Where Do We Stand?
In: Intervirology [55], 108-112
Journal Article
lengauer2013bLengauer, Thomas
Bock, Christoph
2012Managing drug resistance in cancer: lessons from HIV therapy
In: Nature Reviews Cancer [12], 494-501
Journal Article
lengauer2013fHalachev, Konstantin
Bast, H.
Lengauer, Thomas
Bock, Christoph
2013Interactive exploration of large genome and epigenome datasets in real time
In: Genome Biology [13], xx
Journal Article
lengauer2013gSimmer, F.
Brinkmann, A.B.
Assenov, Yassen
Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Article
lengauer2013hDietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
Journal Article
lengauer2013jBhadra, T.
Battacharya, M.
Feuerbach, L.
Lengauer, Thomas
Bandyopadhyay, S.
2013DNA Methylation Patterns Facilitate the Identification of Transcription Start Sites: A Brain-specofoc Study
In: PLOSONE [8], xx
Journal Article
lengauer2013kBeggel, Bastian
Münk, C.
Däumer, M.
Hauck, K.
Häussinger, D.
Lengauer, Thomas
Ehrhardt, A.
2013Full genome ultra-deep pyrosequencing associates G-to-A-hypermutation of the hepatitis B virus genome with the natural progression of hepatitis B
In: Journal of Viral Hepatitis [12], 882-889
Journal Article
lengauer2013lTolosi, Laura
Theißen, J.
Halachev, Konstantin
Hero, B.
Berthold, F.
Lengauer, Thomas
2013A method for finding consensus breakpoints in the cancer genome from copy number data
In: Bioinformatics [29], 1793-1800
Journal Article
lengauer2013mSchelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
2013Sensitive detection of viral transcripts in human tumor transcriptomes
In: PLOS Computational Biology [9], xx
Journal Article
LengauerBioInf1_2007Lengauer (ed.)2007Bioinformatics - From Genomes to Therapies 1. The Building Blocks: Molecular Sequences and StructuresBook
LengauerBioInf2_2007Lengauer (ed.)2007Bioinformatics - From Genomes to Therapies 2. Getting at the Inner Workings: Molecular InteractionsBook
LengauerBioInf3_2007Lengauer (ed.)2007Bioinformatics - From Genomes to Therapies 3. The Holy Grail: Molecular FunctionBook
LengauerISMB2007Lengauer, Rost, Schuster (ed.)2007Proceedings ISMB2007Proceedings
LengauerKaiser2009aLengauer, Thomas
Kaiser, Rolf
2009Computerjagd auf das AIDSVIRUS
In: Spektrum der Wissenschaft [08], 62-67
Journal Article
LengauerLenhof2002aLengauer, Lenhof (ed.)2002Proceedings of the European Conference on Computational Biology (ECCB 2002)Proceedings
LengauerNatRev2006Lengauer, Thomas
Sing, Tobias
2006Bioinformatics-assisted anti-HIV therapy
In: Nature Reviews Microbiology [4], 790-797
Journal Article
LengauerSander2007Lengauer, Thomas
Sander, Oliver
Sierra, Saleta
Thielen, Alexander
Kaiser, Rolf
2007Bioinformatics prediction of HIV coreceptor usage
In: Nature Biotechnology [25], 1407-1410
Journal Article
LengauerSing2009Trignetti, Maria
Sing, Tobias
Svicher, Valentina
Santoro, Maria Mercedes
Forbici, Federica
D'Arrigo, Roberta
Bellocchi, Maria Concetta
Santoro, Mario
Marconi, Patrizia
Zaccarelli, Mauro
Trotta, Maria Paola
Bellagamba, Rita
Narciso, Pasquale
Antinori, Andrea
Lengauer, Thomas
Perno, Carlo Federico
Ceccherini-Silberstein, Francesca
2009Dynamics of NRTI resistance mutations during therapy interruption
In: AIDS Research and Human Retroviruses [25], 57-64
Journal Article
lengauerwelsch2010Mihm, Ulrike
Hofmann, W.P.
Welsch, Christoph
Polta, A.
Lengauer, Thomas
Zeuzem, Stefan
Sarrazin, Christoph
Herrmann, E.
2010Effect of ribavirin on the frequency of RNAse L cleavage sites within the hepatitis C viral genome
In: Journal of Viral Hepatitis [17], 217-221
Journal Article
LengauerZeuzem2007Lengauer, Thomas
Albrecht, Mario
Sarrazin, C.
Mihm, U.
Herrmann, E.
Welsch, Christoph
Sarrazin, U.
Traver, S.
Zeuzem, S.
2005Clinical significance of in vitro replication-enhancing mutations of the hepatitis C virus (HCV) replicon in patients with chronic HCV infection.
In: Journal of Infectious Diseases [192], 1710-1719
Journal Article
LengauerZeuzem2009Mihm, Ulrike
Ackermann, Oliver
Welsch, Christoph
Herrmann, Eva
Hofmann, Wolf Peter
Grigorian, Natalia
Welker, Martin Walter
Lengauer, Thomas
Zeuzem, Stefan
Sarrazin, Christoph
2009Clinical relevance of the 2'-5'-oligoadenylate synthetase/RNase L system for treatment response in chronic hepatitis C
In: Journal of Hepatology [50], 49-58
Journal Article
LengauerZhu2006Lengauer, Thomas
Domingues, F.S.
Sommer, Ingolf
Zhu, Hongbo
2006Analysis and prediction of protein-protein-interaction types
In: BMC Bioinformatics [7], -
Journal Article
LengKaiSie2009Lengauer, Thomas
Sierra, S.
Kaiser, Rolf
2009Resistenzbestimmung
In: MMW Fortschritte in der Medizin [151], 74-75
Journal Article
Lenguaer2004eHannemann, A.
Schön, J.C.
Jansen, M.
Putz, H.
Lengauer, Thomas
2004Modelling amorphous Si3B3N7: Structure and elastic properties
In: Physical Review [B 70], 144201-144201
Journal Article
Liu2007Liu, Fang
Tostesen, Eivind
Sundet, Jostein K.
Jenssen, Tor-Kristian
Bock, Christoph
Jerstad, Geir Ivar
Thilly, William G.
Hovig, Eivind
2007Attachment IconThe human genomic melting map
In: PLoS Computational Biology [3], e93
Journal Article
Loi2010aLoi, Luu Phuc2010Identifying discriminative motifs for molecular function of proteins
Universität des Saarlandes
Thesis - Masters thesis
LowDong2007Low, Andrew J.
Dong, Winnie
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Sing, Tobias
Swanstrom, Ronald
Jensen, Mark
Pillai, Satish
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Harrigan, P. Richard
2007Current V3 genotyping algorithms are inadequate for predicting X4 co-receptor usage in clinical isolates
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Lutsik2010aLutsik, Pavlo2010Processing of high-throughput DNA methylation data
Universität des Saarlandes
Thesis - Masters thesis
LutsikFeuerbach2011Lutsik, Pavlo
Feuerbach, Lars
Arand, Julia
Lengauer, Thomas
Walter, Jörn
Bock, Christoph
2011BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing
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Mangels2009Mangels, Miriam2009In Silico Models for the Prediction of Metabolism by Cytochrome P450 Enzymes
Universität des Saarlandes
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Maydt2002aMaydt, Jochen
Lienhart, Rainer
2002A Fast Method for Training Support Vector Machines With a Very Large Set of Linear Features
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Maydt2002bLienhart, Rainer
Maydt, Jochen
2002An Extended Set of Haar-like Features for Rapid Object Detection
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Maydt2006Maydt, Jochen
Lengauer, Thomas
2006Recco: recombination analysis using cost optimization
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maydt2008Maydt, Jochen2008Analysis of recombination in Molecular Sequence Data
Universität des Saarlandes
Thesis - PhD thesis
Mayr2007Mayr, Gabriele
Domingues, Francisco S.
Lackner, Peter
2007Attachment IconComparative Analysis of Protein Structure Alignments
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McGovern2010McGovern, Rachel A
Thielen, Alexander
Mo, Theresa
Dong, Winnie
Woods, Conan K
Chapman, Douglass
Lewis, Marilyn
James, Ian
Heera, Jayvant
Valdez, Hernan
Harrigan, P Richard
2010Population-based V3 genotypic tropism assay: a retrospective analysis using screening samples from the A4001029 and MOTIVATE studies
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McHardy2009cMcHardy, Alice C.
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2009The role of genomics in tracking the evolution of influenza A virus
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Meiser2005Meiser, Ina2005Identification of functionally important regions in cytochrome P450 systems and a systematic analysis of various CYP P450 homology models
Universität des Saarlandes
Thesis - Bachelor thesis
Merkwirth2003ECCTDMerkwirth, Christian
Ogorzalek, Maciej
Wichard, Jörg Daniel
2003Attachment IconStochastic Gradient Descent Training of Ensembles of DT-CNN Classifiers for Digit Recognition
In: Proceedings of the 16th European Conference on Circuit Theory and Design ECCTD'03, 337-341
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Merkwirth2004aMerkwirth, Christian
Bröcker, J.
Ogorzalek, Maciej
Wichard, J.D.
2004Finite iteration DT-CNN - new design and operation principles
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Merkwirth2004bMerkwirth, Christian
Mauser, H.
Schulz-Gasch, T.
Roche, O.
Stahl, M.
Lengauer, Thomas
2004Ensemble methods for classification in cheminformatics
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Merkwirth2004dWichard, J.D.
Ogorzalek, Maciej
Merkwirth, Christian
Bröcker, J.
2004Finite iteration DT-CNN with stationary templates
In: Proceedings of the 8th IEEE International Workshop on Cellular Neural Networks and their Applications (CNNA 2004), 459-464
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Mikeska2007Mikeska, Thomas
Bock, Christoph
El-Maarri, Osman
Hübner, Anika
Ehrentraut, Denise
Schramm, Johannes
Felsberg, Jörg
Kahl, Philip
Büttner, Reinhard
Pietsch, Torsten
Waha, Andreas
2007Attachment IconOptimization of Quantitative MGMT Promoter Methylation Analysis Using Pyrosequencing and Combined Bisulfite Restriction Analysis
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Moores2008Moores, Andrew
Thielen, Alexander
Dong, Winnie
Low, Andrew J.
Woods, Conan
Jensen, Mark
Wynhoven, Brian
Chan, Dennison
Glascock, Christopher
Harrigan, P Richard
2008Improved detection of X4 virus by V3 genotyping: application to plasma RNA and proviral DNA
In: Antiviral Therapy, A99
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Moser2009Moser, Dirk
Ekawardhani, Savira
Kumsta, Robert
Palmason, Haukur
Bock, Christoph
Athanassiadou, Zoi
Lesch, Klaus-Peter
Meyer, Jobst
2009Attachment IconFunctional Analysis of a Potassium-Chloride Co-Transporter 3 (SLC12A6) Promoter Polymorphism Leading to an Additional DNA Methylation Site
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Mueller2006Müller, Oliver2007Using Shape Retrieval Techniques for Identifying Similar Protein Binding Sites
Universität des Saarlandes
Thesis - Masters thesis
Mueller2009Müller, Fabian2009Assessing Antibody Neutralization of HIV-1 as an Initial Step in the Search for gp160-based Immunogens
Universität des Saarlandes
Thesis - Masters thesis
MuellerMaster2012Müller, Joachim2012Extracting pathways from biological networks incorporating omics data, introducing a webinterface for KeyPathwayMiner
Universität des Saarlandes
Thesis - Masters thesis
NB2003aBeerenwinkel, Niko2004Methoden zur Interpretation genotypischer Resistenztests
In: Resistenz in der HIV-Therapie : Diagnostik und Management, 66-68
Part of a Book
NB2003bBeerenwinkel, Niko2004Das Arevir-Projekt : neue Wege zur Optimierung von Anti-HIV-Therapien
In: Resistenz in der HIV-Therapie : Diagnostik und Management, 94-98
Part of a Book
Nebot2011Nebot, Victoria
Ye, Min
Albrecht, Mario
Eom, Jae-Hong
Weikum, Gerhard
2011DIDO: a disease-determinants ontology from web sources
In: Proceedings of the 20th International Conference on World Wide Web (WWW 2011), 237-240
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Nickels2005aNickels, Stefan2005Attachment IconGenerating Molecular Hashcodes for
Finding Duplicates in Virtual Screening
Libraries
Universität des Saarlandes
Thesis - Bachelor thesis
Obermeier2008Obermeier, Martin
Sichtig, Nadine
Braun, Patrick
Däumer, Martin
Walter, Hauke
Noah, Christian
Wolf, Eva
Müller, Harm
Stürmer, Martin
Kaiser, Rolf
Thielen, Alexander
2008Determination of HIV-1 coreceptor usage in German patients - comparison of genotypic methods with the TROFILE phenotypic assay
In: Antiviral Therapy, A112
Poster
Obermeier2008GlasgowObermeier, Martin
Berg, Thomas
Sichtig, Nadine
Braun, Patrick
Däumer, Martin
Walter, Hauke
Noah, Christian
Wolf, Eva
Müller, Harm
Stürmer, Martin
Thielen, Alexander
Kaiser, Rolf
2008Determination of HIV-1 co-receptor usage in German patients – comparison of genotypic methods with the TROFILE® phenotypic assay
In: Abstracts of the Ninth International Congress on Drug Therapy in HIV Infection, 123
Poster
Obermeier2012Obermeier, Martin
Pironti, Alejandro
Berg, Thomas
Braun, Patrick
Däumer, Martin
Eberle, Josef
Ehret, Robert
Kaiser, Rolf
Kleinkauf, Niels
Korn, Klaus
Kücherer, Claudia
Müller, Harm
Noah, Christian
Stürmer, Martin
Thielen, Alexander
Wolf, Eva
Walter, Hauke
2012HIV-GRADE: A Publicly Available, Rules-Based Drug Resistance Interpretation Algorithm Integrating Bioinformatic Knowledge
In: Intervirology [55], 102-107
Journal Article
Oette2012bOette, Mark
Schulter, Eugen
Rosen-Zvi, Michal
Peres, Yardena
Zazzi, Maurizio
Sonnerborg, Anders
Struck, Daniel
Altmann, Andre
Kaiser, Rolf
2012Efficacy of antiretroviral therapy switch in HIV-infected patients: A 10-year analysis of the EuResist cohort
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Patil2013Patil, Kaustubh Raosaheb2013Genome Signature based Sequence Comparison for Taxonomic Assignment and tree inference
Universität des Saarlandes
Thesis - PhD thesis
pauling2012coryneregnetPauling, Josch
Röttger, Richard
Tauch, Andreas
Azevedo, Vasco
Baumbach, Jan
2012CoryneRegNet 6.0 - Updated database content, new analysis methods and novel features focusing on community demands
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Journal Article
pauling2012ehecPauling, Josch
Röttger, Richard
Neuner, Andreas
Salgado, Heladia
Collado-Vides, Julio
Kalaghatgi, Prabhav
Azevedo, Vasco
Tauch, Andreas
Pühler, Alfred
Baumbach, Jan
2012On the trail of EHEC/EAEC - unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria
In: Integrative Biology [4], 728-733
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PeinadoLengauer2003aPeinado, M.
Lengauer, Thomas
2003Parallel "go with the winners algorithms" in Distributed Memory Models
In: Journal of Parallel and Distributed Processing [63], 801-814
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Perner2008_bachelorPerner, Juliane2008Attachment IconSemi-Supervised Learning for Predicting Anti-HIV Drug Resistance
Universität des Saarlandes
Thesis - Bachelor thesis
Perner2010aPerner, Juliane2010Finding local similarities in gene expression patterns between partially reprogrammed cells and know cell types using a module network approach
Universität des Saarlandes
Thesis - Masters thesis
Pfeifer2006aPfeifer, Susanne2006Development of a fast
geometry-based screening
compound prefiltering technique
Universität des Saarlandes
Thesis - Bachelor thesis
Pfeifer2012Pfeifer, Nico
Lengauer, Thomas
2012Attachment IconImproving HIV coreceptor usage prediction in the clinic using hints from next-generation sequencing data
In: Bioinformatics [28], i589-i595
Journal Article
PfeiferLengauer2013Pfeifer, Nico
Lengauer, Thomas
2013Association Between HIV-1 Coreceptor Usage and Resistance to Some Broadly Neutralizing Antibodies
In: Proceedings of the AIDS Vaccine Conference 2013, A-1-A-208
Poster
Pironti2009aPironti, Alejandro2009Probabilistic disease gene prioritization
Universität des Saarlandes
Thesis - Masters thesis
Pironti2011Pironti, Alejandro
Altmann, André
Büch, Joachim
Lengauer, Thomas
2011A Computational Method for Predicting First-Line Antiretroviral Therapy Success
In: Abstract Book. 9th Workshop on HIV & Hepatitis Treatment Strategies & Antiviral Drug Resistance, 94
Poster
Pironti2012Pironti, Alejandro
Lengauer, Thomas
Kaiser, Rolf
Schülter, Eugen
Verheyen, Jens
2012Characterization of HIV-1 Gag Subtype C
In: Abstract Book. 9th Workshop on HIV \& Hepatitis Treatment Strategies \& Antiviral Drug Resistance, 40-41
Poster
Pironti2012hiv12aSierra, Saleta
Dzbowski, Jan Nikolaj
Pironti, Alejandro
Gueney, L
Thielen, Alexander
Reuter, Stefan
Esser, Stefan
Fätkenheuer, Gerd
Lengauer, Thomas
Hider, Dominik
Hoffmann, Daniel
Pfister, Holger
Jensen, Björn
Kaiser, Rolf
2012Optimisation of baseline genotypic testing for safe and efficient maraviroc administration
In: Journal of the International AIDS Society, 101-102
Poster
Pironti2012hiv12bObermeier, Martin
Camacho, Ricardo
Charpentier, Charlotte
Deschamps, Diane
Eberle, Joseph
Gürtler, Lutz
Ruelle, Jean
Pironti, Alejandro
Brun-Veziet, Francoise
Stürmer, Martin
Kaiser, Rolf
2012HIV2EU: supporting standardized HIV-2 drug resistance interpretation in Europe
In: Journal of the International AIDS Society, 135
Poster
Pironti2012hiv12cSchuelter, Eugen
Lübcke, Nadine
Jensen, Björn
Zazzi, Maurizio
Sönnerborg, Anders
Lengauer, Thomas
Incardona, Francesca
Camacho, Richardo
Schmit, J
Clotet, Bonaventura
Kaiser, Rolf
Pironti, Alejandro
2012Etravirine in protease inhibitor-free antiretroviral combination therapies
In: Journal of the International AIDS Society, 155-156
Poster
Pironti2013Pironti, Alejandro2013HIV-1 fitness landscape models for indinavir treatment pressure using observed evolution in longitudinal sequence data are predictive for treatment failure
In: Infection, Genetics and Evolution [19], 349–360
Journal Article
Pironti2013Pironti, Alejandro
Lengauer, Thomas
Pfeifer, Nico
2013Effects of sequencing errors on geno2pheno[coreceptor] predictions
In: Abstract Book 11th European Meeting on HIV & Hepatitis, 23-24
Poster
Pironti2013Pironti, Alejandro
Lengauer, Thomas
Pfeifer, Nico
2013In silico analysis of the effects of sequencing errors on geno2pheno[coreceptor]
In: Abstract Book of the International Workshop on HIV&Hepatitis Virus, A142
Poster
Pironti2013Pironti, Alejandro
Pfeifer, Nico
Kaiser, Rolf
Walter, Hauke
Lengauer, Thomas
2014Improved HIV-1 drug-exposure reconstruction with linear support vector machines
In: Reviews in Antiviral Therapy & Infectious Diseases, 67
Poster
Pironti2013Pironti, Alejandro
Pfeifer, Nico
Lengauer, Thomas
2014Improved HIV-1 drug-exposure reconstruction with linear support vector machines
In: Reviews in Antiviral Therapy & Infectious Diseases, 67
Poster
Pironti2013bPironti, Alejandro
Pfeifer, Nico
Kaiser, Rolf
Walter, Hauke
Lengauer, Thomas
2014Accurate prediction of drug-exposure without using established drug-resistance mutations
In: Antiviral Therapy, A75
Poster
Pironti2013bPironti, Alejandro
Pfeifer, Nico
Lengauer, Thomas
2014Accurate prediction of drug-exposure without using established drug-resistance mutations
In: Antiviral Therapy, A75
Poster
Pironti2013cPironti, Alejandro
Lengauer, Thomas
Pfeifer, Nico
2014Simulation of Sanger-sequencing errors in the context of genotypic tropism determination
In: Antiviral Therapy, A81
Poster
Pironti2013cPironti, Alejandro
Sierra, Saleta
Kaiser, Rolf
Lengauer, Thomas
Pfeifer, Nico
2014Simulation of Sanger-sequencing errors in the context of genotypic tropism determination
In: Antiviral Therapy, A81
Poster
Pironti2013dPironti, Alejandro
Pfeifer, Nico
Kaiser, Rolf
Walter, Hauke
Lengauer, Thomas
2014Improved therapy-success prediction with GSS estimated from clinical HIV-1 sequences
In: Abstract Supplement of the HIV Drug Therapy Glasgow Congress 2014, 155
Poster
Prosperi2010aProsperi, Mattia C. F.
Rosen-Zvi, Michal
Altmann, Andre
Zazzi, Maurizio
Di Giambenedetto, Simona
Kaiser, Rolf
Schülter, Eugen
Struck, Daniel
Sloot, Peter
van de Vijver, David A.
Vandamme, Anne-Mieke
Sönnerborg, Anders
2010Antiretroviral Therapy Optimisation without Genotype Resistance Testing: A Perspective on Treatment History Based Models
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Rahnenf2001aRahnenführer, Jörg2003Statistical Inference for Clustering Microarrays
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Rahnenf2002aRahnenführer, Jörg
Bozinov, Daniel
2002Unsupervised technique for robust target separation and analysis of DNA microarray spots through adaptive pixel clustering
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Rahnenf2002bRahnenführer, Jörg2002Multivariate permutation tests for the k-sample problem with clustered data
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Rahnenf2002cBozinov, Daniel
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Burson, Cathy
Spiegelstein, Ofer
2002Automated Grid Alignment for High-Throughput Analysis of Microarray Images (CIIST-02)
In: Proceedings of the 2002 International Conference on Imaging Science, Systems, and Technology, 161-167
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Rahnenf2002dRahnenführer, Jörg2002Hybrid clustering for microarray analysis combining intensity and shape features
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Rahnenf2003aRahnenführer, Jörg2003On preferences of general two-sided tests with applications to Kolmogorov-Smirnov-type tests
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Rahnenf2003cRahnenführer, Jörg2003Efficient Clustering Methods for Tumor Classification with Microarrays
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Rahnenf2003dRahnenführer, Jörg
Bozinov, Daniel
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Rahnenfuehrer2003eRahnenführer, Jörg
Futschik, Andreas
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Rahnenfuehrer2003fJames, Jackson
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Leon, FAS
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Rahnenfuehrer2004aRahnenführer, Jörg
Domingues, Francisco S.
Maydt, Jochen
Lengauer, Thomas
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Rahnenfuehrer2004bJames, Jackson
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Rahnenführer, Jörg
Ahmad, Iqbal
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Rahnenfuehrer2004cJames, Jackson
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Zhao, Xing
Rahnenführer, Jörg
Ahmad, Iqbal
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Rahnenfuehrer2004dRahnenführer, Jörg
Bozinov, Daniel
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Rahnenfuehrer2005aRahnenführer, Jörg
Beerenwinkel, Niko
Schulz, Wolfgang A.
Hartmann, Christian
von Deimling, Andreas
Wullich, Bernd
Lengauer, Thomas
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Rahnenfuehrer2005bRahnenführer, Jörg2005Image analysis for cDNA microarrays
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James, Jackson
Rahnenführer, Jörg
Thoresona, Wallace B.
Bhattacharyaa, Sumitra
Zhao, Xing
Ahmad, Iqbal
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Rahnenfuehrer2006HabilRahnenführer, Jörg2006Statistical methods for the biological interpretation of genome-wide measurements
Universität des Saarlandes
Thesis - Habilitation thesis
Rahnenfuehrer2007aRahnenführer, Jörg
Lengauer, Thomas
2007Analysis of Expression Data: Classification of genes
In: Bioinformatics - From Genomes to Therapies 2. Getting at the Inner Workings: Molecular Interactions, 993-1021
Part of a Book
Rahnenfuehrer2007cSchulz, Wolfgang A.
Alexa, Adrian
Jung, Volker
Hader, Christiane
Hoffmann, Michele J.
Yamanaka, Masanori
Fritzsche, Sandy
Wlazlinski, Agnes
Müller, Mirko
Lengauer, Thomas
Engers, Rainer
Florl, Andrea R.
Wullich, Bernd
Rahnenführer, Jörg
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Rahnenfuehrer2007dKetter, Ralf
Kim, Yoo-Jin
Storck, Simone
Rahnenführer, Jörg
Romeike, Bernd F.M.
Steudel, Wolf-Ingo
Zang, Klaus D.
Henn, Wolfram
2007Attachment IconHyperdiploidy defines a distinct cytogenetic entity of meningiomas
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Davis, Sean
Stöckle, Michael
Meltzer, Paul
Wullich, Bernd
2007Detection of Novel Amplicons in Prostate Cancer by Comprehensive Genomic Profiling of Prostate Cancer Cell Lines Using Oligonucleotide-Based ArrayCGH
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Ramirez2004_thesisRamírez, Fidel2004Hacia una comprension de la accion de la recombinacion genetica y la mutacion en el origen de la variacion fenotipica, mediante el analisis de la computacion evolutiva
Universidad Nacional de Colombia
Thesis - Masters thesis
Ramirez2010Ramirez, Fidel2010Tutorial Cytoscape
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Ramirez2012thRamirez, Fidel2012Novel Approaches to the Integration and Analysis of Systems Biology
Universität des Saarlandes
Thesis - PhD thesis
Ray2003Jose, Joachim
Betschieder, Dirk
Ray, Somak
Lengauer, Thomas
Zangen, D
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Reimer2006Reimer, Daniela2006Docking studies to investigate the effect of correlated mutations in the HIV-Protease on the drug resistance of HIV
Universität des Saarlandes
Thesis - Bachelor thesis
Reppas2012Reppas, Andreas
Lawyer, Glenn
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Kaiser, Rolf
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Adams, Ortwin
Lengauer, Thomas
Faetkenheuer, Gerd
Pfister, Herbert
Haeussinger, Dieter
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Reuter2010bReuter, Stefan
Oette, Mark
Wilhelm, Frank Clemens
Beggel, Bastian
Kaiser, Rolf
Balduin, Melanie
Schweitzer, Finja
Verheyen, Jens
Adams, Ortwin
Lengauer, Thomas
Faetkenheuer, Gerd
Pfister, Herbert
Haeussinger, Dieter
2011Attachment IconErratum to: Prevalence and characteristics of hepatitis B and C virus infections in treatment-naïve HIV-infected patients.
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Reuter2011Reuter, Kerstin2011Estimating and Using the Uncertainty in the Phenotypic Resistance Assay of the Hepatitis B Virus to Improve IC-50 Prediction from Genotype
Universität des Saarlandes
Thesis - Bachelor thesis
Reuter2012aReuter, Stefan
Oette, Mark
Kaiser, Rolf
Lengauer, Thomas
Fätkenheuer, Gerd
Rockstroh, Jürgen
Knechten, Heribert
Häussinger, Dieter
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Rhee2010Rhee, Soo-Yon
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Nguyen, Mindie
Liu, Tommy
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Beggel, Bastian
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roettger2012densityRöttger, Richard
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roettger2012littleRöttger, Richard
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roettger2012onlineRöttger, Richard
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Welsch, Christoph
Wang, Yalan
Zettler, Markus
Domingues, Francisco S.
Karey, Ursula
Hughes, Eric
Ralston, Robert
Tong, Xiao
Herrmann, Eva
Zeuzem, Stefan
Sarrazin, Christoph
2009Characterization of resistance to the protease inhibitor boceprevir in hepatitis C virus-infected patients.
In: Hepatology [50], 1709-1718
Journal Article
Svicher2005aSvicher, Valentina
Ceccherini-Silberstein, Francesca
Sing, Tobias
Santoro, Maria Mercedes
Gori, C.
Beerenwinkel, Niko
Gago, F.
D'Arrigo, R.
Bellochi, M.C.
Giannella, S.
Bertoli, A.
D'Arminio Monforte, A.
Antinori, A.
Perno, Carlo-Federico
2005A highly ordered network of HIV-1 RT mutations regulates the continuous escape from antiviral drugs
In: International Workshop in HIV Dynamics and Evolution, -
Proceedings Article
Svicher2005bSvicher, Valentina
Ceccherini-Silberstein, Francesca
Sing, Tobias
Santoro, Maria Mercedes
Gori, C.
Beerenwinkel, Niko
Gago, F.
D'Arrigo, R.
Bellocchi, M. C.
Giannella, S.
Bertoli, A.
D'Arminio Monforte, A.
Antinori, A.
Perno, Carlo-Federico
2005Additional Mutations in HIV-1 Reverse Transcriptase are Involved in the Highly Ordered Regulation of NRTI Resistance
In: Proceedings of the 3rd European HIV Drug Resistance Workshop, -
Proceedings Article
Svicher2011Svicher, Valentina
Cento, Valeria
Salpini, Romina
Mercurio, Fabio
Fraune, Maria
Beggel, Bastian
Han, Yue
Gori, Caterina
Wittkop, Linda
Bertoli, Ada
Micheli, Valeria
Gubertini, Guido
Longo, Roberta
Romano, Sara
Visca, Michela
Gallinaro, Valentina
Marino, Nicoletta
Mazzotta, Francesco
De Sanctis, Giuseppe Maria
Fleury, Hervè
Trimoulet, Pascale
Angelico, Mario
Cappiello, Giuseppina
Zhang, Xin Xin
Verheyen, Jens
Ceccherini-Silberstein, Francesca
Perno, Carlo Federico
2011Role of hepatitis B virus genetic barrier in drug-resistance and immune-escape development
In: Digestive and Liver Disease [43], 975-983
Journal Article
Swenson2010Swenson, Luke C.
Moores, Andrew
Low, Andrew J.
Thielen, Alexander
Dong, Winnie
Woods, Conan
Jensen, Mark A.
Wynhoven, Brian
Chan, Dennison
Glascock, Christopher
Harrigan, P. Richard
2010Improved detection of CXCR4-using HIV by V3 genotyping: application of population-based and "deep" sequencing to plasma RNA and proviral DNA
In: Journal of Acquired Immune Deficiency Syndromes [54], 506-510
Journal Article
Swenson2010aSwenson, Luke C.
Boehme, Richard
Thielen, Alexander
McGovern, Rachel A.
Harrigan, P. Richard
2010Genotypic determination of HIV-1 tropism in the clinical setting
In: HIV Therapy [4], 293-303
Journal Article
Swenson2011Swenson, Luke C.
Mo, Theresa
Dong, Winnie W. Y.
Zhong, Xiaoyin
Woods, Conan K.
Jensen, Mark A.
Thielen, Alexander
Chapman, Douglass
Lewis, Marilyn
James, Ian
Heera, Jayvant
Valdez, Hernan
Harrigan, P. Richard
2011Deep Sequencing to Infer HIV-1 Co-Receptor Usage: Application to Three Clinical Trials of Maraviroc in Treatment-Experienced Patients
In: The Journal of Infectious Diseases [203], 237-245
Journal Article
Swenson2011bSwenson, Luke C
Mo, Theresa
Dong, Winnie WY
Zhong, Xiaoyin
Woods, Conan K
Thielen, Alexander
Jensen, Mark A
Knapp, David JHF
Chapman, Douglass
Lewis, Marilyn
James, Ian
Heera, Jayvant
Valdez, Hernan
Harrigan, P Richard
2011Deep V3 sequencing for HIV type 1 tropism in treatment-naive patients: a reanalysis of the MERIT trial of maraviroc.
In: Clinical Infectious Diseases [53], 732-742
Journal Article
S.Domingues2006Domingues, Francisco S.
Lengauer, Thomas
2007Inferring Protein Function from Protein Structure
In: Bioinformatics - From Genomes to Therapies 3. The Holy Grail: Molecular Function, 1211-1252
Part of a Book
Talwar2003Talwar, Priti
Lengauer, Thomas
Wittmann, Christoph
Mangadu, Vidya
Heinzle, Elmar
2003Towards cellular function through metabolite screening
In: Proceedings of the 3rd Annual Conference on Metabolic Profiling: Pathways in Discovery, 7
Proceedings Article
Talwar2003aTalwar, Priti
Wittmann, Christoph
Lengauer, Thomas
Heinzle, Elmar
2003Software tool for automated processing of 13C labeling data from mass spectrometry data
In: BioTechniques [35], 1214-1215
Journal Article
Talwar2004aTalwar, Priti
Lengauer, Thomas
Rahnenführer, Jörg
Velagapudi, VR
Wittmann, Christoph
Heinzle, Elmar
2004Computational Methods For Metabolite Screening
In: Proceedings of the 12th International Conference on Intelligent Systems for Molecular Biology + 3rd European Conference on Computational Biology (ISMB/ECCB 2004), 1
Poster
Talwar2004bTalwar, Priti
Lengauer, Thomas
Rahnenführer, Jörg
Velagapudi, VR
Wittmann, Christoph
Heinzle, Elmar
2004Computational Methods For Metabolite Screening
In: Proceedings of the 5th International Conference on Systems Biology (ICSB 2004), 1
Poster
Talwar2005Talwar, Priti
Lengauer, Thomas
Rahnenführer, Jörg
Wittmann, Christoph
Velagapudi, VR
Heinzle, Elmar
2005Computational Methods for Protein Function Prediction using Metabolomics Data
In: Proceedings of International Workshop on Systems Biology 2005, 1
Poster
Talwar2006Talwar, Priti
Lengauer, Thomas
Wittmann, Christoph
Velagapudi, V. R.
Heinzle, Elmar
2006Development of Computational Methods for Analysis of Metabolic Profiling Data
In: Proceedings of International Conference on Systems Biology (ICSB 2006), Japan, 42-42
Proceedings Article
Talwar2006aTalwar, Priti
Lengauer, Thomas
Rahnenführer, Jörg
Heinzle, Elmar
Velagapudi, VR
Wittmann, Christoph
2005Towards computational analysis of metabolic profiling data for protein function prediction.
In: Proceedings of the Yeast Systems Biology, 6th International Conference on Systems Biology (ICSB 2005), 1
Poster
talwar2008Talwar, Priti2008Development of Computational Methods for Metabolic Network Analysis based on Metabolomics Data
Universität des Saarlandes
Thesis - PhD thesis
Thielen2006Thielen, Alexander2006Prediction of linear B-cell epitopes and MHC class II binding peptides
Eberhardt-Karls-Universität Tübingen
Thesis - Masters thesis
Thielen2008EDRWThielen, Alexander
Sichtig, Nadine
Braun, Patrick
Däumer, Martin
Walter, Hauke
Noah, Christian
Wolf, Eva
Müller, Harm
Stürmer, Martin
Lengauer, Thomas
Kaiser, Rolf
Obermeier, Martin
2009Performance of genotypic coreceptor measurement using geno2pheno[coreceptor] in B- and non-B HIV subtypes in a large cohort of therapy-experienced patients in Germany
In: Reviews in Antiviral Therapy, 99-99
Poster
Thielen2008EntryThielen, Alexander
Kaiser, Rolf
Lengauer, Thomas
2008Improving HIV-1 coreceptor usage prediction from genotype with regions outside of V3
In: Reviews in Antiviral Therapy, 81-82
Poster
Thielen2008IDRWThielen, Alexander
Harrigan, P Richard
Low, Andrew J.
Moores, A
Altmann, Andre
Bozek, Kasia
Heger, Eva
Sichtig, Nadine
Kaiser, Rolf
Lengauer, Thomas
2008Improved genotypic prediction of HIV-1 coreceptor usage by incorporating V2 loop sequence variation
In: Antiviral Therapy, A100
Poster
Thielen2009IDRWThielen, Alexander
Altmann, André
Bogojeska, Jasmina
Kaiser, Rolf
Lengauer, Thomas
2009Estimating evolutionary pathways to 7CXCR4 usage from cross-sectional data
In: Abstracts presented at the XVIII International HIV Drug Resistance Workshop : Basic Principles & Clinical Implications, A16-A16
Poster
Thielen2010Thielen, Alexander
Sichtig, Nadine
Kaiser, Rolf
Lam, Jeffrey
Harrigan, P. Richard
Lengauer, Thomas
2010Improved prediction of HIV-1 coreceptor usage with sequence information from the second hypervariable loop of gp120
In: Journal of Infectious Diseases [202], 1435-1443
Journal Article
Thielen2010EDRWThielen, Alexander
Lengauer, Thomas
Harrigan, P Richard
Swenson, Luke
Dong, Winnie WY
McGovern, Rachel A
Lewis, Marilyn
James, Ian
Heera, Jayvant
Valdez, Hernan
2010Mutations within GP41 are correlated with coreceptor tropism but do not substantially improve coreceptor usage prediction
In: Reviews in Antiviral Therapy & Infectious Diseases, 47-47
Poster
Thielen2010gp41Thielen, Alexander
Lengauer, Thomas
Swenson, Luke C
Dong, Winnie W.Y.
McGovern, Rachel A
Lewis, Marilyn
James, Ian
Heera, Jayvant
Valdez, Hernan
Harrigan, P Richard
2011Mutations in gp41 are correlated with coreceptor tropism but do not improve prediction methods substantially
In: Antiviral Therapy [16], 319-328
Journal Article
Thielen2011Thielen, Alexander
Lengauer, Thomas
2012Geno2pheno[454]: A Web Server for the Prediction of HIV-1 Coreceptor Usage from Next-Generation Sequencing Data
In: Intervirology [55], 113-117
Journal Article
Thielen2011dissThielen, Alexander2011Genotypic Analysis of HIV-1 Coreceptor Usage
Universität des Saarlandes
Thesis - PhD thesis
Tolosi2006Tolosi, Laura2006Analysis of Array CGH Data for the Estimation of Genetic Tumor Progression
Universität des Saarlandes
Thesis - Masters thesis
tolosi2009Sos, Martin L.
Michel, Kathrin
Zander, Thomas
Weiss, Jonathan
Frommolt, Peter
Pfeifer, Martin
Li, Danan
Ullrich, Roland
Koker, Mirjam
Fischer, Florian
Shimamura, Takeshi
Rauh, Daniel
Mermel, Craig
Fischer, Stefanie
Stückrath, Isabel
Heynck, Stefanie
Beroukhim, Rameen
Lin, William
Winckler, Wendy
Shah, Kinjal
LaFramboise, Thomas
Moriarty, Whei F.
Hanna, megan
Tolosi, Laura
Rahnenführer, Jörg
Verhaak, Roel
Chiang, Derek
Getz, Gad
Hellmich, Martin
Wolf, Jürgen
Girard, Luc
Peyton, Michael
Weir, Barbara A.
Chen, Tzu-Hsiu
Greulich, Heidi
Barretina, Jordi
Shapiro, Geoffrey I.
Garraway, Levi A.
Gazdar, Adi F.
Minna, John D.
Meyerson, Matthew
Wong, Kwok-Kin
Thomas, Roman K.
2009Predicting drug susceptibility of non-small cell lung cancers based on genetic lesions
In: Journal of Clinical Investigation [119], 1727-1740
Journal Article
Tolosi2011Tolosi, Laura
Lengauer, Thomas
2011Classification with correlated features: unreliability of feature ranking and solutions
In: Bioinformatics [27], 1986-1994
Journal Article
Tolosi2012thTolosi, Laura2012Finding Regions of Aberrant DNA Copy Number Associated With Tumor Phenotype
Universität des Saarlandes
Thesis - PhD thesis
Trajkovski2004Trajkovski, Igor2004Analysis of protein binding pocket flexibility
Universität des Saarlandes
Thesis - Masters thesis
Verheyen2006Verheyen, Jens
Litau, Elena
Sing, Tobias
Däumer, Martin
Balduin, Melanie
Oette, Mark
Fätkenheuer, Gerd
Rockstroh, Jürgen K.
Schuldenzucker, Ulrike
Hoffmann, Daniel
Pfister, Herbert
Kaiser, Rolf
2006Compensatory mutations at the HIV cleavage sites p7/p1 and p1/p6-gag in therapy-naive and therapy-experienced patients
In: Antiviral Therapy [11], 879-887
Journal Article
Verheyen2008aVerheyen, Jens
Altmann, Andre
Knops, Elena
Schülter, Eugen
Sichtig, Nadine
Reuter, Stefan
Fätkenheuer, Gerd
Pfister, Herbert
Kaiser, Rolf
2008Relevance of HIV gag cleavage site mutations in failures of protease inhibitor therapies
In: Antiviral Therapy, A53
Poster
Volkamer2006aVolkamer, Andrea2005Attachment IconImplementation of a method to filter
out compounds with toxic, reactive
and unsuitable functional groups
Universität des Saarlandes
Thesis - Bachelor thesis
Volkamer2007Volkamer, Andrea2007Automated generation of pharmacophore type constraints to improve FlexX docking
Universität des Saarlandes
Thesis - Masters thesis
vonOehsen2003von Öhsen, Niklas
Sommer, Ingolf
Zimmer, Ralf
2003Profile-Profile Alignment: A Powerful Tool For Protein Structure Prediction
In: Pacific Symposium on Biocomputing, PSB 2003, 252-263
Proceedings Article
Weimann2009aWeimann, Aaron2009Using multidimensional Scaling for visualizing similarities of proteins
Universität des Saarlandes
Thesis - Bachelor thesis
Weimann2011aWeimann, Aaron2011Functional Profiling in Metagenomics
Universität des Saarlandes
Thesis - Masters thesis
Weinhold2006Weinhold, Nils2006Inference of Protein Function based on Functionally Conserved Regions in Sequence and Structure Space
Universität des Saarlandes
Thesis - Masters thesis
Weinhold2008Weinhold, Nils
Sander, Oliver
Domingues, Francisco S.
Lengauer, Thomas
Sommer, Ingolf
2008Attachment IconLocal function conservation in sequence and structure space
In: PLoS Computational Biology [4], e1000105
Journal Article
Weiss2005aWeiss, Julia2005Attachment IconGenerating Frequency Profiles from Multiple
Structure Alignments
Universität des Saarlandes
Thesis - Bachelor thesis
Weisser2007Weisser, Hendrik2007Estimating the local variance of protein structure models
Universität des Saarlandes
Thesis - Masters thesis
Weisser2010aWeisser, Hendrik
Altmann, André
Sierra, Saleta
Incardona, Francesca
Struck, Daniel
Sönnerborg, Anders
Kaiser, Rolf
Zazzi, Maurizio
Tschochner, Monika
Walter, Hauke
Lengauer, Thomas
2010Only Slight Impact of Predicted Replicative Capacity for Therapy Response Prediction
In: PLoSOne [5], e9044,1-e9044,10
Electronic Journal Article
Welker2011Welker, M.-W.
Welsch, Christoph
Ochs, D.
Hofmann, W. P.
Herrmann, E.
Piiper, A.
Hartmann, R. W.
Zeuzem, S.
Sarrazin, C.
Kronenberger, Bernd
2011Comparison of Envelope 2 CD81 binding regions in PBMC-derived versus serum-derived hepatitis C virus isolates: higher conservation of CD81 region 2 in PBMC isolates
In: Journal of Viral Hepatitis [18], 181-192
Journal Article
Welsch2011Hofmann, Wolf Peter
Chung, Tje Lin
Osbahr, Carola
Susser, Simone
Karey, Ursel
Mihm, Ulrike
Welsch, Christoph
Lötsch, Jörn
Sarrazin, Christoph
Zeuzem, Stefan
Herrmann, Eva
2011Impact of ribavirin on HCV replicon RNA decline during treatment with interferon-α and the protease inhibitors boceprevir or telaprevir
In: Antiviral Therapy [16], 695-704
Journal Article
Welsch2012zWelsch, Christoph
Schweizer, Sabine
Shimakami, Testsuro
Domingues, Francisco S.
Kim, Seungtaek
Lemon, Stanley, M.
Antes, Iris
2012Ketoamide Resistance and Hepatitis C Virus Fitness in Val55 Variants
of the NS3 Serine Protease
In: Antimicrobial Agents and Chemotherapy [56], 1907-1915
Journal Article
Wemmert05Wemmert, Silke
Ketter, Ralf
Rahnenführer, Jörg
Beerenwinkel, Niko
Strowitzki, Martin
Feiden, Wolfgang
Hartmann, Christian
Lengauer, Thomas
Stockhammer, Florian
Zang, Klaus D.
Meese, Eckart
Steudel, Wolf-Ingo
von Deimling, Andreas
Urbschat, Steffi
2005Attachment IconPatients with high grade gliomas harboring delections of chromosomes 9p and 10q benefit from temozolomide treatment
In: Neoplasia [7], 883-893
Journal Article
Wittkop2010Wittkop, Tobias
Emig, Dorothea
Lange, Sita
Rahmann, Sven
Albrecht, Mario
Morris, John H.
Böcker, Sebastian
Stoye, Jens
Baumbach, Jan
2010Partitioning biological data with transitivity clustering
In: Nature Methods [7], 419-420
Journal Article
Wittkop2011Wittkop, Tobias
Emig, Dorothea
Truss, Anke
Albrecht, Mario
Böcker, Sebastian
Baumbach, Jan
2011Comprehensive cluster analysis with Transitivity Clustering
In: Nature Protocols [6], 285-295
Journal Article
Wohlers2010Wohlers, Inken
Domingues, Francisco S.
Klau, Gunnar W.
2010Towards optimal alignment of protein structure distance matrices
In: Bioinformatics [26], 2273-2280
Journal Article
Xi2011Xi, Yuanxin
Bock, Christoph
Müller, Fabian
Sun, Deqiang
Meissner, Alexander
Li, Wei
2011RRBSMAP: A Fast, Accurate and User-friendly Alignment Tool for Reduced Representation Bisulfite Sequencing
In: Bioinformatics [28], 430-432
Journal Article
Xi2012Xi, Yuanxin
Bock, Christoph
Müller, Fabian
Sun, Deqiang
Meissner, Alexander
Li, Wei
2012RRBSMAP: a fast, accurate and user-friendly alignment tool for reduced representation bisulfite sequencing
In: Bioinformatics [28], 430-432
Journal Article
Yalak2004aYalak, Garif2005Attachment IconAnalysis of Mutations in the Death Domains, Death Effector Domains, Caspase
Recruitment Domains, and Pyrin Domains
Universität des Saarlandes
Thesis - Bachelor thesis
Yamanishir2011Yamanishi, Yoshihiro
Pauwels, Edouard
Saigo, Hiroto
Stovent, Veronique
2011Extracting Sets of Chemical Substructures and Protein Domains Governing Drug-Target Interactions
In: Journal of Chemical Information and Modeling [51], 1183-1194
Journal Article
Yin05Yin, Junming
Beerenwinkel, Niko
Rahnenführer, Jörg
Lengauer, Thomas
2006Attachment IconModel Selection for Mixtures of Mutagenetic Trees
In: Statistical Applications in Genetics and Molecular Biology [5], Article 17
Journal Article
Yin2005aYin, Junming2005Model Selection for Mixtures of Mutagenetic Trees
Universität des Saarlandes
Thesis - Masters thesis
Zacharek2011Zacharek, Sima J.
Fillmore, Christine M.
Lau, Allison N.
Gludish, David W.
Chou, alan
Ho, Joshua W. K.
Zamponi, Raffaella
Gazit, Roi
Bock, Christoph
Jäger, Natalie
Smith, Zachary D.
Kim, Tae-min
Saunders, Arven H.
Wong, Janice
Lee, Joo-Hyeon
Roach, Rebecca R.
Rossi, Derrick J.
Meissner, Alex
Gimelbrant, Alexander A.
Park, Peter J.
Kim, Carla F.
2011Lung stem cell self-renewal relies on BMI1-dependent control of expression at imprinted loci
In: Cell Stem Cell [9], 272-280
Journal Article
Zazzi2010aZazzi, Maurizio
Kaiser, Rolf
Sönnerborg, Anders
Struck, Daniel
Altmann, Andre
Prosperi, Mattia C. F.
Rosen-Zvi, Michal
Petroczi, Andrea
Peres, Yardena
Schülter, Eugen
Boucher, Charles
Brun-Vezinet, Francoise
Harigan, Richard
Morris, Lynn
Obermeier, Martin
Perno, Federico
Shafer, Robert
Vandamme, Anne-Mieke
van Laethem, Kristel
Wensing, Annemarie
Lengauer, Thomas
Incardona, Francesca
2010Prediction of Response to Antiretroviral Therapy by Human Experts and by the EuResist Data-Driven Expert System (the EVE Study)
In: HIV Medicine [Early View], 1-8
Electronic Journal Article
Zazzi2012Zazzi, Maurizio
Incardona, Francesca
Rosen-Zvi, Michal
Prosperi, Mattia
Lengauer, Thomas
Altmann, Andre
Sonnerborg, Anders
Lavee, Tamar
Schülter, Eugen
Kaiser, Rolf
2012Predicting Response to Antiretroviral Treatment by Machine Learning:
The EuResist Project
In: Intervirology [55], 123-127
Journal Article
ZazziEU2006Zazzi, Maurizio
Aharoni, Ehud
Altmann, Andre
Baszó, Fulop
Bidgood, Penny
Borgulya, Gabór
Denholm-Prince, J
Fielder, M
Kaiser, Rolf
Kent, Carmel
Lengauer, Thomas
Nepusz, T
Neuvirth, Hanni
Peres, Yardena
Petroczi, Andrea
Prosperi, Mattia
Romano, L
Rosen-Zvi, Michal
Schülter, Eugen
Sing, Tobias
Sonnerborg, Andras
Thompson, R
Ulivi, G
Zalány, L
Incardona, Francesca
2007EuResist: exploration of multiple modeling techniques for prediction of response to treatment
In: Proceedings of the 5th European HIV Drug Resistance Workshop, -
Poster
ZeidlerBachelor2012Zeidler, Michael2012Cloudbasierte Analyse von viralen Sequenzdaten der neuesten Generation
Universität des Saarlandes
Thesis - Bachelor thesis
Zhang2009Zhang, Yingying
Rohde, Christian
Tierling, Sascha
Jurkowski, Tomasz P.
Bock, Christoph
Santacruz, Diana
Ragozin, Sergey
Reinhardt, Richard
Groth, Marco
Walter, Jörn
Jeltsch, Albert
2009Attachment IconDNA methylation analysis of chromosome 21 gene promoters at single base pair and single allele resolution
In: PLoS Genetics [5], e1000438:1-e1000438:15
Electronic Journal Article
Zhu2005Zhu, Hongbo
Domingues, Francisco S.
Sommer, Ingolf
Lengauer, Thomas
2005Analysis and prediction of protein-protein interaction types
In: 4th European Conference on Computational Biology (ECCB05), 1
Poster
Zhu2006Zhu, Hongbo
Domingues, Francisco S.
Sommer, Ingolf
Lengauer, Thomas
2006NOXclass: prediction of protein-protein interaction types
In: BMC Bioinformatics [7], 1-15
Electronic Journal Article
Zhu2008Zhu, Hongbo
Sommer, Ingolf
Lengauer, Thomas
Domingues, Francisco S.
2008Attachment IconAlignment of Non-Covalent Interactions at Protein-Protein Interfaces
In: PLoS ONE [3], e1926
Journal Article
Zhu2010aZhu, Hongbo2010Characterization, classification and alignment of protein-protein interfaces
Universität des Saarlandes
Thesis - PhD thesis
Ziller2011Ziller, Michael J.
Müller, Fabian
Liao, Jing
Zhang, Yingying
Gu, Hongcang
Bock, Christoph
Boyle, Patrick
Epstein, Charles B.
Bernstein, Bradley E.
Lengauer, Thomas
Gnirke, Andreas
Meissner, Alexander
2011Genomic distribution and inter-sample variation of non-CpG methylation across human cell types
In: PLoS Genetics [17], e1002389,1-e1002389,15
Electronic Journal Article
Ziller2013Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal Article
Zimmer2006aZimmer, Tobias2006Functional Site Scaffolds
Universität des Saarlandes
Thesis - Bachelor thesis
Zotenko2008Zotenko, Elena
Mestre, Julian
O'Leary, Dianne
Przytycka, Teresa
2008Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality
In: PLoS Computational Biology [4], e1000140
Journal Article
?Ifrim, Georgiana2005A Bayesian Learning Approach to Concept-Based Document Classification
Universität des Saarlandes
Thesis - Masters thesis
?Johannsen, Daniel2010Random Combinatorial Structures and Randomized Search Heuristics
Universität des Saarlandes
Thesis - PhD thesis

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