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#Author/EditorYearTitleTypeBibTeX cite key
1
Hide details for Abril, JFAbril, JF
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Achkar, Jean-PaulAchkar, Jean-Paul
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Achten, DominikAchten, Dominik
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Akerman, MAkerman, M
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
4
Hide details for Albrecht, MarioAlbrecht, Mario
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Kacprowski, Tim
Doncheva, Nadezhda T.
Albrecht, Mario
2013Attachment IconNetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules
In: Bioinformatics [29], 1471-1473
Journal ArticleAlbrecht2013d
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Alexander, GraemeAlexander, Graeme
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Alexa, AdrianAlexa, Adrian
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Alioto, TAlioto, T
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Altmüller, J.Altmüller, J.
Schelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
2013Sensitive detection of viral transcripts in human tumor transcriptomes
In: PLOS Computational Biology [9], xx
Journal Articlelengauer2013m
1
Hide details for Altucci, L.Altucci, L.
Simmer, F.
Brinkmann, A.B.
Assenov, Yassen
Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Articlelengauer2013g
1
Hide details for Alvaro, DomenicoAlvaro, Domenico
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Ambalavanan,NamasivayamAmbalavanan,Namasivayam
Schulz, Marcel Holger
Pandit, Kusum V
Lino Cardenas, Christian L
Ambalavanan,Namasivayam
Kaminski, Naftali
Bar-Joseph, Ziv
2013Reconstructing dynamic microRNA-regulated interaction networks
In: Proceedings of the National Academy of Sciences of the United States [110], 15686–15691
Journal ArticleSchulzB2013
1
Hide details for Ambrosini, GAmbrosini, G
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Andersen, VibekeAndersen, Vibeke
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Anderson, Carl A.Anderson, Carl A.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Andreassen, Ole A.Andreassen, Ole A.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
2
Hide details for Annese, VitoAnnese, Vito
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Antonarakis, SEAntonarakis, SE
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
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2
Hide details for Assenov, YassenAssenov, Yassen
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
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Pajares, Maria J.
Torre, Wenceslao
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Brambilla, Elisabeth
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Altucci, L.
Stunnenberg, H.G.
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In: Epigenetics [7], 1355-1367
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1
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Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
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Erdin, Serkan
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Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
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van Dijk, Aalt D J
Braak, Cajo J F Ter
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Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
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Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
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Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
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In: Nature Methods [10], 221-227
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Röttger, Richard
Kalaghatgi, Prabhav
Sun, Peng
de Castro Soares, Siomar
Azevedo, Vasco
Wittkop, Tobias
Baumbach, Jan
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Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
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Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
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Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
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Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
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Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
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Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
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Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
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Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
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Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
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van Dijk, Aalt D J
Braak, Cajo J F Ter
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Dong, Xinran
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Oron, Tal Ronnen
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Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
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1
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Bar-Joseph, Ziv
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In: Proceedings of the National Academy of Sciences of the United States [110], 15686–15691
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Halachev, Konstantin
Bast, H.
Lengauer, Thomas
Bock, Christoph
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Feuerbach, L.
Lengauer, Thomas
Bandyopadhyay, S.
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Hide details for Baumbach, JanBaumbach, Jan
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Baumbach, Jan
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Baumbach, Jan
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Chen, Guoan
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Lengauer, Thomas
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Ehrhardt, A.
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In: Journal of Viral Hepatitis [12], 882-889
Journal Articlelengauer2013k
Neumann-Fraune, Maria
Beggel, Bastian
Pfister, Herbert
Kaiser, Rolf
Verheyen, Jens
Stop sign Icon2013High frequency of complex mutational patterns in lamivudine resistant hepatitis B virus isolates
In: Journal of Medical Virology [200], 39-49
Journal ArticleBeggel2013a
1
Hide details for Behr, JBehr, J
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Ben-Hur, AsaBen-Hur, Asa
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
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Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
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Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
1
Hide details for Bergquist, AnnikaBergquist, Annika
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Berg, T.Berg, T.
Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
Journal Articlelengauer2013h
1
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Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
2
Hide details for Berthold, F.Berthold, F.
Schelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
2013Sensitive detection of viral transcripts in human tumor transcriptomes
In: PLOS Computational Biology [9], xx
Journal Articlelengauer2013m
Tolosi, Laura
Theißen, J.
Halachev, Konstantin
Hero, B.
Berthold, F.
Lengauer, Thomas
2013A method for finding consensus breakpoints in the cancer genome from copy number data
In: Bioinformatics [29], 1793-1800
Journal Articlelengauer2013l
1
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Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Berzuini, Carlo R.Berzuini, Carlo R.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
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Bhadra, T.
Battacharya, M.
Feuerbach, L.
Lengauer, Thomas
Bandyopadhyay, S.
Stop sign Icon2013DNA Methylation Patterns Facilitate the Identification of Transcription Start Sites: A Brain-specofoc Study
In: PLOSONE [8], xx
Journal Articlelengauer2013j
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Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
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Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Bjornsson, EinarBjornsson, Einar
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Blankenburg, HagenBlankenburg, Hagen
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
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1
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Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Boberg, Kirsten MuriBoberg, Kirsten Muri
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
3
Hide details for Bock, ChristophBock, Christoph
Halachev, Konstantin
Bast, H.
Lengauer, Thomas
Bock, Christoph
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In: Genome Biology [13], xx
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Mendez-Gonzales, Jesus
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Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
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Rosell, Rafael
Beer, David G.
Esteller,Manel
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Simmer, F.
Brinkmann, A.B.
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Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Articlelengauer2013g
1
Hide details for Boehm, ArianeBoehm, Ariane
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
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Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
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Linial, Michal
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Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Boehm, Bernhard O.Boehm, Bernhard O.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
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Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
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Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
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Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Bohnert, RBohnert, R
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Bowlus, Christopher L.Bowlus, Christopher L.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
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Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
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Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
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Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
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Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
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Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Bozek, K.Bozek, K.
Bozek, K.
Lengauer, Thomas
Sierra, S.
Kaiser, Rolf
Domingues, F.S.
Stop sign Icon2013Analysis of physicochemical and structural properties determining HIV-1 coreceptor usage
In: PLoS Computational Biology [x], x
Journal Articlelengauer2012g
1
Hide details for Braak, Cajo J F TerBraak, Cajo J F Ter
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
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Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Brambilla, ElisabethBrambilla, Elisabeth
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
2
Hide details for Brand, StephanBrand, Stephan
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Braun, FelixBraun, Felix
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Braun, TatjanaBraun, Tatjana
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Brenner, Steven EBrenner, Steven E
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Brinkmann, A.B.Brinkmann, A.B.
Simmer, F.
Brinkmann, A.B.
Assenov, Yassen
Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Articlelengauer2013g
1
Hide details for Bromberg, YanaBromberg, Yana
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Bryson, KevinBryson, Kevin
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Buchan, Daniel W ABuchan, Daniel W A
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Bucher, PBucher, P
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Büning, CarstenBüning, Carsten
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Carmona, F. JavierCarmona, F. Javier
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Casadio, RitaCasadio, Rita
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Chapman, Roger W.Chapman, Roger W.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Chazouilleres, OlivierChazouilleres, Olivier
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Cheng, JianlinCheng, Jianlin
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Chen, GuoanChen, Guoan
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Chitale, MeghanaChitale, Meghana
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Cho, JudyCho, Judy
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Clark, Wyatt TClark, Wyatt T
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Cleynen, IsabelleCleynen, Isabelle
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Cloonan, NCloonan, N
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Colantuoni, V.Colantuoni, V.
Simmer, F.
Brinkmann, A.B.
Assenov, Yassen
Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Articlelengauer2013g
1
Hide details for Cozzetto, DomenicoCozzetto, Domenico
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Croucher, Peter J. P.Croucher, Peter J. P.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for DD
1
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1
Hide details for v{s}ov{s}o
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for D'Addario, MariannaD'Addario, Marianna
Hauschild, Anne-Christin
Kopczynski, Dominik
D'Addario, Marianna
Baumbach, Joerg Ingo
Rahmann, Sven
Baumbach, Jan
2013Peak Detection Method Evaluation for Ion Mobility Spectrometry by using Machine Learning Approaches
In: Metabolites [3], 277-293
Electronic Journal ArticleHauschild2012c
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Hide details for D'Amato, MauroD'Amato, Mauro
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Dalekos, GeorgiosDalekos, Georgios
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Dale, Anders M.Dale, Anders M.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Daly, Mark J.Daly, Mark J.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
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In: Gastroenterology [145], 339-347
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1
Hide details for Datta, AvikDatta, Avik
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
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Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
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Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
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Häussinger, D.
Lengauer, Thomas
Ehrhardt, A.
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Schelhorn, Sven-Eric
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Mihm, U.
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Füller, C.
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Teuber, G.
Wedemeyer, H.
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Lengauer, Thomas
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Sarrazin, C.
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Heyn, Holger
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Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
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Brambilla, Elisabeth
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Esteller,Manel
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Röttger, Richard
Kalaghatgi, Prabhav
Sun, Peng
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Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
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Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
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1
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Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
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Zerbino, D
Zhang, MQ
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Guigó, R
Harrow, J
Bertone, P
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In: Nature Methods [10], 1177-84
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1
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Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
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Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
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Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
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1
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Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
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Hide details for Djuric, NemanjaDjuric, Nemanja
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Domingues, Francisco S.Domingues, Francisco S.
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Domingues, F.S.Domingues, F.S.
Bozek, K.
Lengauer, Thomas
Sierra, S.
Kaiser, Rolf
Domingues, F.S.
Stop sign Icon2013Analysis of physicochemical and structural properties determining HIV-1 coreceptor usage
In: PLoS Computational Biology [x], x
Journal Articlelengauer2012g
1
Hide details for Donaghey, JulieDonaghey, Julie
Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
4
Hide details for Doncheva, Nadezhda T.Doncheva, Nadezhda T.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Kacprowski, Tim
Doncheva, Nadezhda T.
Albrecht, Mario
2013Attachment IconNetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules
In: Bioinformatics [29], 1471-1473
Journal ArticleAlbrecht2013d
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Dong, XinranDong, Xinran
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Dorfman, RuslanDorfman, Ruslan
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Dudoit, SDudoit, S
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
2
Hide details for Duerr, Richard H.Duerr, Richard H.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Durie, Peter R.Durie, Peter R.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Du, JDu, J
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Ehrhardt, A.Ehrhardt, A.
Beggel, Bastian
Münk, C.
Däumer, M.
Hauck, K.
Häussinger, D.
Lengauer, Thomas
Ehrhardt, A.
Stop sign Icon2013Full genome ultra-deep pyrosequencing associates G-to-A-hypermutation of the hepatitis B virus genome with the natural progression of hepatitis B
In: Journal of Viral Hepatitis [12], 882-889
Journal Articlelengauer2013k
1
Hide details for Eksteen, BertusEksteen, Bertus
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
2
Hide details for Ellinghaus, DavidEllinghaus, David
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
2
Hide details for Ellinghaus, EvaEllinghaus, Eva
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Engström, PGEngström, PG
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Engström,PGEngström,PG
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Erdin, SerkanErdin, Serkan
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Esteller,ManelEsteller,Manel
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Falda, MarcoFalda, Marco
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Fang, HaiFang, Hai
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Farkkila, MarttiFarkkila, Martti
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Feuerbach, L.Feuerbach, L.
Bhadra, T.
Battacharya, M.
Feuerbach, L.
Lengauer, Thomas
Bandyopadhyay, S.
Stop sign Icon2013DNA Methylation Patterns Facilitate the Identification of Transcription Start Sites: A Brain-specofoc Study
In: PLOSONE [8], xx
Journal Articlelengauer2013j
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Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Fischer, M.Fischer, M.
Schelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
2013Sensitive detection of viral transcripts in human tumor transcriptomes
In: PLOS Computational Biology [9], xx
Journal Articlelengauer2013m
1
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Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
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1
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Folseraas, TrineFolseraas, Trine
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Fontana, PaoloFontana, Paolo
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Forster, MichaelForster, Michael
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
2
Hide details for Franke, AndreFranke, Andre
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Friedberg, IddoFriedberg, Iddo
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Füller, C.Füller, C.
Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
Journal Articlelengauer2013h
1
Hide details for Funk, ChristopherFunk, Christopher
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Gatzmann, FannyGatzmann, Fanny
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Gerstein, MGerstein, M
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Gingeras, TRGingeras, TR
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Glas, JürgenGlas, Jürgen
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Gnirke, AndreasGnirke, Andreas
Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
1
Hide details for Gomez, AntonioGomez, Antonio
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Gong, QingtianGong, Qingtian
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Gonzalez, DGonzalez, D
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Goodall, JaneGoodall, Jane
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Gotthardt, Daniel NilsGotthardt, Daniel Nils
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Gough, JulianGough, Julian
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Graim, KileyGraim, Kiley
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Grimmond, SMGrimmond, SM
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Guigó, RGuigó, R
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Guo, YuhongGuo, Yuhong
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Gutierrez-Achury, JavierGutierrez-Achury, Javier
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Gu, HongcangGu, Hongcang
Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
1
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Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Habegger, LHabegger, L
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
2
Hide details for Halachev, KonstantinHalachev, Konstantin
Halachev, Konstantin
Bast, H.
Lengauer, Thomas
Bock, Christoph
Stop sign Icon2013Interactive exploration of large genome and epigenome datasets in real time
In: Genome Biology [13], xx
Journal Articlelengauer2013f
Tolosi, Laura
Theißen, J.
Halachev, Konstantin
Hero, B.
Berthold, F.
Lengauer, Thomas
2013A method for finding consensus breakpoints in the cancer genome from copy number data
In: Bioinformatics [29], 1793-1800
Journal Articlelengauer2013l
1
Hide details for Halfvarson, JonasHalfvarson, Jonas
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Hamp, TobiasHamp, Tobias
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Harrow, JHarrow, J
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
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Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
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Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
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Till, Andreas
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Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
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Krawczak, Michael
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Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
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Münk, C.
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Ehrhardt, A.
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In: Journal of Viral Hepatitis [12], 882-889
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Baumbach, Joerg Ingo
Baumbach, Jan
2013Attachment IconPaving the Way for Automated Clinical Breath Analysis and Biomarker DetectionMiscellaneousHauschild2013b
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Kopczynski, Dominik
D'Addario, Marianna
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Rahmann, Sven
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Hauschild, Anne-Christin
Baumbach, Joerg Ingo
Baumbach, Jan
2013An Integrative Clinical Database and Diagnostics Platform for Biomarker Identification and Analysis in Ion Mobility Spectra of Human Exhaled Air
In: Journal of Integrative Bioinformatics [10],
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Ehrhardt, A.
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In: Journal of Viral Hepatitis [12], 882-889
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1
Hide details for Hecht, MaximilianHecht, Maximilian
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
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Brenner, Steven E
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Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
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1
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Heron, MarkHeron, Mark
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
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Tolosi, Laura
Theißen, J.
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Hero, B.
Berthold, F.
Lengauer, Thomas
2013A method for finding consensus breakpoints in the cancer genome from copy number data
In: Bioinformatics [29], 1793-1800
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1
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Schelhorn, Sven-Eric
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Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
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Sandoval, Juan
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Sayols, Sergi
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Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
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1
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Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
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In: PLoS ONE [8], 1-17
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1
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Le, Hai-Son
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McCauley, Brenna MM
Hinman, Veronica F
Bar-Joseph, Ziv
2013Probabilistic error correction for RNA sequencing
In: Nucleic Acids Researcb [41], e109
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Holm, LiisaHolm, Liisa
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Hopf, Thomas AHopf, Thomas A
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Hov, Johannes RoksundHov, Johannes Roksund
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Hubbard, TJHubbard, TJ
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Hveem, KristianHveem, Kristian
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Illig, ThomasIllig, Thomas
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Inamdar, HarshalInamdar, Harshal
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Invernizzi, PietroInvernizzi, Pietro
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Iseli, CIseli, C
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Jean, GJean, G
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Jiang, FumanJiang, Fuman
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Jiang, TaoJiang, Tao
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Jones, David TJones, David T
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Joshi, RajendraJoshi, Rajendra
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Juran, Brian D.Juran, Brian D.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
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Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
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Simmer, F.
Brinkmann, A.B.
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Matarese, F.
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Lengauer, Thomas
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Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
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Doncheva, Nadezhda T.
Albrecht, Mario
2013Attachment IconNetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules
In: Bioinformatics [29], 1471-1473
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Steijger, T
Abril, JF
Engström,PG
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Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
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Bozek, K.
Lengauer, Thomas
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Domingues, F.S.
Stop sign Icon2013Analysis of physicochemical and structural properties determining HIV-1 coreceptor usage
In: PLoS Computational Biology [x], x
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Pfister, Herbert
Kaiser, Rolf
Verheyen, Jens
Stop sign Icon2013High frequency of complex mutational patterns in lamivudine resistant hepatitis B virus isolates
In: Journal of Medical Virology [200], 39-49
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Lawyer, Glenn
2013Inter-country mixing in HIV transmission clusters: a pan-European phylodynamics study
In: Abstract Book 11th European HIV & Hepatitis Workshop, 9
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Kalaghatgi, Prabhav
Sun, Peng
de Castro Soares, Siomar
Azevedo, Vasco
Wittkop, Tobias
Baumbach, Jan
2013Density Parameter Estimation for Finding Clusters of Homologous Proteins - Tracing Actinobacterial Pathogenicity Life Styles
In: Bioinformatics [29], 215-222
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Pfeifer, Nico
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2013Modelling binding between CCR5 and CXCR4 receptors and their ligands suggests the surface electrostatic potential of the co-receptor to be a key player in the HIV-1 tropism
In: Retrovirology [10], 130
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Schulz, Marcel Holger
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Bar-Joseph, Ziv
2013Reconstructing dynamic microRNA-regulated interaction networks
In: Proceedings of the National Academy of Sciences of the United States [110], 15686–15691
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Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
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Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
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Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
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Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Kaufmann, StefanieKaufmann, Stefanie
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Kayser, ManfredKayser, Manfred
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Keller, AndreasKeller, Andreas
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Kiening, MichaelKiening, Michael
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Kihara, DaisukeKihara, Daisuke
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Klein, ChristineKlein, Christine
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
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Hide details for Kohlbacher, OliverKohlbacher, Oliver
Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
1
Hide details for Kokocinski, FKokocinski, F
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Konig, Inke R.Konig, Inke R.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Kopczynski, DominikKopczynski, Dominik
Hauschild, Anne-Christin
Kopczynski, Dominik
D'Addario, Marianna
Baumbach, Joerg Ingo
Rahmann, Sven
Baumbach, Jan
2013Peak Detection Method Evaluation for Ion Mobility Spectrometry by using Machine Learning Approaches
In: Metabolites [3], 277-293
Electronic Journal ArticleHauschild2012c
1
Hide details for Koskinen, PatrikKoskinen, Patrik
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Kourmpetis, Yiannis A IKourmpetis, Yiannis A I
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Krawczak, MichaelKrawczak, Michael
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Krompass, DenisKrompass, Denis
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Kupcinskas, LimasKupcinskas, Limas
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Lagarde, JLagarde, J
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Landerer, CedricLanderer, Cedric
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Lan, LiangLan, Liang
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Latiano, AnnaLatiano, Anna
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Lavezzo, EnricoLavezzo, Enrico
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Lawyer, GlennLawyer, Glenn
Kalaghatgi, Prabhav
Lawyer, Glenn
2013Inter-country mixing in HIV transmission clusters: a pan-European phylodynamics study
In: Abstract Book 11th European HIV & Hepatitis Workshop, 9
PosterKalaghatgi2013
1
Hide details for Lazaridis, Konstantinos N.Lazaridis, Konstantinos N.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Lee, JamesLee, James
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Lefebvre, GLefebvre, G
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
13
Hide details for Lengauer, ThomasLengauer, Thomas
Beggel, Bastian
Lengauer, Thomas
2013Inferring short-range linkage information from sequencing chromatograms
In: PLoS One,
Electronic Journal ArticleBeggel2013b
Beggel, Bastian
Münk, C.
Däumer, M.
Hauck, K.
Häussinger, D.
Lengauer, Thomas
Ehrhardt, A.
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In: Journal of Viral Hepatitis [12], 882-889
Journal Articlelengauer2013k
Bhadra, T.
Battacharya, M.
Feuerbach, L.
Lengauer, Thomas
Bandyopadhyay, S.
Stop sign Icon2013DNA Methylation Patterns Facilitate the Identification of Transcription Start Sites: A Brain-specofoc Study
In: PLOSONE [8], xx
Journal Articlelengauer2013j
Bozek, K.
Lengauer, Thomas
Sierra, S.
Kaiser, Rolf
Domingues, F.S.
Stop sign Icon2013Analysis of physicochemical and structural properties determining HIV-1 coreceptor usage
In: PLoS Computational Biology [x], x
Journal Articlelengauer2012g
Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
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Halachev, Konstantin
Bast, H.
Lengauer, Thomas
Bock, Christoph
Stop sign Icon2013Interactive exploration of large genome and epigenome datasets in real time
In: Genome Biology [13], xx
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Kalinina, Olga
Pfeifer, Nico
Lengauer, Thomas
2013Modelling binding between CCR5 and CXCR4 receptors and their ligands suggests the surface electrostatic potential of the co-receptor to be a key player in the HIV-1 tropism
In: Retrovirology [10], 130
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Pfeifer, Nico
Lengauer, Thomas
2013Association Between HIV-1 Coreceptor Usage and Resistance to Some Broadly Neutralizing Antibodies
In: Proceedings of the AIDS Vaccine Conference 2013, A-1-A-208
PosterPfeiferLengauer2013
Pironti, Alejandro
Lengauer, Thomas
Pfeifer, Nico
2013Effects of sequencing errors on geno2pheno[coreceptor] predictions
In: Abstract Book 11th European Meeting on HIV & Hepatitis, 23-24
PosterPironti2013
Pironti, Alejandro
Lengauer, Thomas
Pfeifer, Nico
2013In silico analysis of the effects of sequencing errors on geno2pheno[coreceptor]
In: Abstract Book of the International Workshop on HIV&Hepatitis Virus, A142
PosterPironti2013
Schelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
2013Sensitive detection of viral transcripts in human tumor transcriptomes
In: PLOS Computational Biology [9], xx
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Simmer, F.
Brinkmann, A.B.
Assenov, Yassen
Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Articlelengauer2013g
Tolosi, Laura
Theißen, J.
Halachev, Konstantin
Hero, B.
Berthold, F.
Lengauer, Thomas
2013A method for finding consensus breakpoints in the cancer genome from copy number data
In: Bioinformatics [29], 1793-1800
Journal Articlelengauer2013l
1
Hide details for Leng, JLeng, J
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Leppa, VirpiLeppa, Virpi
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Lewis, SLewis, S
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Le, Hai-SonLe, Hai-Son
Le, Hai-Son
Schulz, Marcel Holger
McCauley, Brenna MM
Hinman, Veronica F
Bar-Joseph, Ziv
2013Probabilistic error correction for RNA sequencing
In: Nucleic Acids Researcb [41], e109
Journal ArticleSchulzA2013
1
Hide details for Lichtarge, OlivierLichtarge, Olivier
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Liloglou, TriantafillosLiloglou, Triantafillos
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Limaye, BhaktiLimaye, Bhakti
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Linial, MichalLinial, Michal
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
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1
Hide details for Lino Cardenas, Christian LLino Cardenas, Christian L
Schulz, Marcel Holger
Pandit, Kusum V
Lino Cardenas, Christian L
Ambalavanan,Namasivayam
Kaminski, Naftali
Bar-Joseph, Ziv
2013Reconstructing dynamic microRNA-regulated interaction networks
In: Proceedings of the National Academy of Sciences of the United States [110], 15686–15691
Journal ArticleSchulzB2013
1
Hide details for Lipinski, SimoneLipinski, Simone
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Lisewski, Andreas MLisewski, Andreas M
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Liu, Jimmy Z.Liu, Jimmy Z.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Liu, QingLiu, Qing
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Liu, XiaoLiu, Xiao
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Lo Iacono, MarcoLo Iacono, Marco
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
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Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
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Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Mahlich, YannickMahlich, Yannick
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Manjari, Sunitha KManjari, Sunitha K
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Manns, Michael P.Manns, Michael P.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Marschall, Hanns-UlrichMarschall, Hanns-Ulrich
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Mason, Andrew L.Mason, Andrew L.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Matarese, F.Matarese, F.
Simmer, F.
Brinkmann, A.B.
Assenov, Yassen
Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Articlelengauer2013g
1
Hide details for Mathew, Christopher G.Mathew, Christopher G.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
2
Hide details for Mayr, GabrieleMayr, Gabriele
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for McArdle, Wendy L.McArdle, Wendy L.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for McCauley, Brenna MMMcCauley, Brenna MM
Le, Hai-Son
Schulz, Marcel Holger
McCauley, Brenna MM
Hinman, Veronica F
Bar-Joseph, Ziv
2013Probabilistic error correction for RNA sequencing
In: Nucleic Acids Researcb [41], e109
Journal ArticleSchulzA2013
1
Hide details for Meissner, AlexanderMeissner, Alexander
Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
1
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Mendez-Gonzales, JesusMendez-Gonzales, Jesus
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Mihm, U.Mihm, U.
Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
Journal Articlelengauer2013h
1
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Mitrovic, MitjaMitrovic, Mitja
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Montuenga, Luis M.Montuenga, Luis M.
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Mooney, Sean DMooney, Sean D
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
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In: Nature Methods [10], 221-227
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1
Hide details for Moran, SebastianMoran, Sebastian
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Mora, JosefinaMora, Josefina
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Mortazavi, AMortazavi, A
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
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2
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Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
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Vizoso, Miguel
Gomez, Antonio
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Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
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Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
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Scagliotti, Giorgio V.
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Beer, David G.
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In: Journal of Clinical Oncology [31], 4140-4147
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Tsai, Linus T.-Y.
Kohlbacher, Oliver
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Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
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In: Nature [500], 477–481
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1
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
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Sans, Miquel
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Achkar, Jean-Paul
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Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
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Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
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Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
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Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
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1
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Beggel, Bastian
Münk, C.
Däumer, M.
Hauck, K.
Häussinger, D.
Lengauer, Thomas
Ehrhardt, A.
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In: Journal of Viral Hepatitis [12], 882-889
Journal Articlelengauer2013k
1
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Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Nadal, ErnestNadal, Ernest
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
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Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
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Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
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Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
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Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Neumann-Fraune, MariaNeumann-Fraune, Maria
Neumann-Fraune, Maria
Beggel, Bastian
Pfister, Herbert
Kaiser, Rolf
Verheyen, Jens
Stop sign Icon2013High frequency of complex mutational patterns in lamivudine resistant hepatitis B virus isolates
In: Journal of Medical Virology [200], 39-49
Journal ArticleBeggel2013a
1
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Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
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Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Nikolaus, SusannaNikolaus, Susanna
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
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Rivas, Manuel A.
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Doncheva, Nadezhda T.
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Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
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Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
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Brand, Stephan
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Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
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1
Hide details for Nokso-Koivisto, JussiNokso-Koivisto, Jussi
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
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Repo, Susanna
Souza, Michael L
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Casadio, Rita
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Fang, Hai
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Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
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Erdin, Serkan
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Yang, Haixuan
Romero, Alfonso E
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Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
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Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
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Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
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Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
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2
Hide details for Nöthen, Markus M.Nöthen, Markus M.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
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Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Nothnagel, MichaelNothnagel, Michael
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Nürnberg, P.Nürnberg, P.
Schelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
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In: PLOS Computational Biology [9], xx
Journal Articlelengauer2013m
1
Hide details for Onengut-Gumuscu, SunaOnengut-Gumuscu, Suna
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Orengo, ChristineOrengo, Christine
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Oron, Tal RonnenOron, Tal Ronnen
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Paccanaro, AlbertoPaccanaro, Alberto
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Padyukov, LeonidPadyukov, Leonid
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Pajares, Maria J.Pajares, Maria J.
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Pandey, GauravPandey, Gaurav
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Pandit, Kusum VPandit, Kusum V
Schulz, Marcel Holger
Pandit, Kusum V
Lino Cardenas, Christian L
Ambalavanan,Namasivayam
Kaminski, Naftali
Bar-Joseph, Ziv
2013Reconstructing dynamic microRNA-regulated interaction networks
In: Proceedings of the National Academy of Sciences of the United States [110], 15686–15691
Journal ArticleSchulzB2013
1
Hide details for Panov, PanPanov, Pan
1
Hide details for v{c}ev{c}e
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Pares, AlbertPares, Albert
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Parkes, MilesParkes, Miles
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Patil, Kaustubh RaosahebPatil, Kaustubh Raosaheb
Patil, Kaustubh Raosaheb2013Genome Signature based Sequence Comparison for Taxonomic Assignment and tree inference
Universität des Saarlandes
Thesis - PhD thesisPatil2013
4
Hide details for Pfeifer, NicoPfeifer, Nico
Kalinina, Olga
Pfeifer, Nico
Lengauer, Thomas
2013Modelling binding between CCR5 and CXCR4 receptors and their ligands suggests the surface electrostatic potential of the co-receptor to be a key player in the HIV-1 tropism
In: Retrovirology [10], 130
Journal ArticleKalinina2013
Pfeifer, Nico
Lengauer, Thomas
2013Association Between HIV-1 Coreceptor Usage and Resistance to Some Broadly Neutralizing Antibodies
In: Proceedings of the AIDS Vaccine Conference 2013, A-1-A-208
PosterPfeiferLengauer2013
Pironti, Alejandro
Lengauer, Thomas
Pfeifer, Nico
2013Effects of sequencing errors on geno2pheno[coreceptor] predictions
In: Abstract Book 11th European Meeting on HIV & Hepatitis, 23-24
PosterPironti2013
Pironti, Alejandro
Lengauer, Thomas
Pfeifer, Nico
2013In silico analysis of the effects of sequencing errors on geno2pheno[coreceptor]
In: Abstract Book of the International Workshop on HIV&Hepatitis Virus, A142
PosterPironti2013
1
Hide details for Pfister, HerbertPfister, Herbert
Neumann-Fraune, Maria
Beggel, Bastian
Pfister, Herbert
Kaiser, Rolf
Verheyen, Jens
Stop sign Icon2013High frequency of complex mutational patterns in lamivudine resistant hepatitis B virus isolates
In: Journal of Medical Virology [200], 39-49
Journal ArticleBeggel2013a
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Schelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
2013Sensitive detection of viral transcripts in human tumor transcriptomes
In: PLOS Computational Biology [9], xx
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Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
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In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Piovesan, DamianoPiovesan, Damiano
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
3
Hide details for Pironti, AlejandroPironti, Alejandro
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Lengauer, Thomas
Pfeifer, Nico
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In: Abstract Book 11th European Meeting on HIV & Hepatitis, 23-24
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Lengauer, Thomas
Pfeifer, Nico
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In: Abstract Book of the International Workshop on HIV&Hepatitis Virus, A142
PosterPironti2013
1
Hide details for Pollan, MarinaPollan, Marina
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
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Scagliotti, Giorgio V.
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Esteller,Manel
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In: Journal of Clinical Oncology [31], 4140-4147
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2
Hide details for Ponsioen, Cyriel Y.Ponsioen, Cyriel Y.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
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Rivas, Manuel A.
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Doncheva, Nadezhda T.
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Liu, Qing
Jiang, Fuman
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Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
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Goodall, Jane
Berzuini, Carlo R.
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Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
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Sanderson, Jeremy D.
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Wang, Jun
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Brand, Stephan
Glas, Jürgen
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Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
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Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
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van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
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Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
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Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Pramstaller, Peter P.Pramstaller, Peter P.
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Radivojac, PredragRadivojac, Predrag
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Rahmann, SvenRahmann, Sven
Hauschild, Anne-Christin
Kopczynski, Dominik
D'Addario, Marianna
Baumbach, Joerg Ingo
Rahmann, Sven
Baumbach, Jan
2013Peak Detection Method Evaluation for Ion Mobility Spectrometry by using Machine Learning Approaches
In: Metabolites [3], 277-293
Electronic Journal ArticleHauschild2012c
1
Hide details for Rakovic, AleksandarRakovic, Aleksandar
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Rätsch, GRätsch, G
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Rentzsch, RobertRentzsch, Robert
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Repo, SusannaRepo, Susanna
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Reymond, AReymond, A
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Ribeca, PRibeca, P
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Ricano-Ponce, IsisRicano-Ponce, Isis
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Richard, HRichard, H
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Rich, Stephen S.Rich, Stephen S.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Rioux, John D.Rioux, John D.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Rivas, Manuel A.Rivas, Manuel A.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Romero, Alfonso ERomero, Alfonso E
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Roos, ManfredRoos, Manfred
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Rosell, RafaelRosell, Rafael
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Rosenstiel, PhilipRosenstiel, Philip
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Rosen, Evan D.Rosen, Evan D.
Ziller, Michael J.
Gu, Hongcang
Müller, Fabian
Donaghey, Julie
Tsai, Linus T.-Y.
Kohlbacher, Oliver
De Jager, Philip L.
Rosen, Evan D.
Bennett, David A.
Bernstein, Bradley E.
Gnirke, Andreas
Meissner, Alexander
2013Charting a dynamic DNA methylation landscape of the human genome
In: Nature [500], 477–481
Journal ArticleZiller2013
1
Hide details for Rost, BurkhardRost, Burkhard
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Röttger, RichardRöttger, Richard
Röttger, Richard
Kalaghatgi, Prabhav
Sun, Peng
de Castro Soares, Siomar
Azevedo, Vasco
Wittkop, Tobias
Baumbach, Jan
2013Density Parameter Estimation for Finding Clusters of Homologous Proteins - Tracing Actinobacterial Pathogenicity Life Styles
In: Bioinformatics [29], 215-222
Journal Articleroettger2012density
1
Hide details for Rougemont, JRougemont, J
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Rozowsky, JRozowsky, J
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Roz, LucaRoz, Luca
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Rushbrook, Simon M.Rushbrook, Simon M.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Rust, ChristianRust, Christian
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Rutgeerts, PaulRutgeerts, Paul
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Saarela, JannaSaarela, Janna
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Salakoski, TapioSalakoski, Tapio
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Sammeth, MSammeth, M
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Sanchez-Cespedes, MontseSanchez-Cespedes, Montse
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Sanderson, Jeremy D.Sanderson, Jeremy D.
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Sandford, Richard N.Sandford, Richard N.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Sandoval, JuanSandoval, Juan
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
2
Hide details for Sans, MiquelSans, Miquel
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Sarrazin, C.Sarrazin, C.
Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
Journal Articlelengauer2013h
1
Hide details for Sayols, SergiSayols, Sergi
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Sboner, ASboner, A
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Scagliotti, Giorgio V.Scagliotti, Giorgio V.
Sandoval, Juan
Mendez-Gonzales, Jesus
Nadal, Ernest
Chen, Guoan
Carmona, F. Javier
Sayols, Sergi
Moran, Sebastian
Heyn, Holger
Vizoso, Miguel
Gomez, Antonio
Sanchez-Cespedes, Montse
Assenov, Yassen
Müller, Fabian
Bock, Christoph
Taron, Miquel
Mora, Josefina
Muscarella, Lucia A.
Liloglou, Triantafillos
Davies, Michael
Pollan, Marina
Pajares, Maria J.
Torre, Wenceslao
Montuenga, Luis M.
Brambilla, Elisabeth
Field, John K.
Roz, Luca
Lo Iacono, Marco
Scagliotti, Giorgio V.
Rosell, Rafael
Beer, David G.
Esteller,Manel
2013A Prognostic DNA Methylation Signature for Stage I Non-Small-Cell Lung Cancer
In: Journal of Clinical Oncology [31], 4140-4147
Journal ArticleSandoval2013
1
Hide details for Schaefer, ChristianSchaefer, Christian
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
2
Hide details for Schelhorn, Sven-EricSchelhorn, Sven-Eric
Dietz, J.
Schelhorn, Sven-Eric
Fitting, D.
Mihm, U.
Susser, S.
Welker, M.-W.
Füller, C.
Däumer, M.
Teuber, G.
Wedemeyer, H.
Berg, T.
Lengauer, Thomas
Z., Stefan
Herrmann, E.
Sarrazin, C.
2013Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of HCV genotype 1-infected patients
In: Journal of Virology [87], 6172-6181
Journal Articlelengauer2013h
Schelhorn, Sven-Eric
Fischer, M.
Tolosi, Laura
Altmüller, J.
Nürnberg, P.
Pfister, H.
Lengauer, Thomas
Berthold, F.
2013Sensitive detection of viral transcripts in human tumor transcriptomes
In: PLOS Computational Biology [9], xx
Journal Articlelengauer2013m
1
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Schneider, Till
Hauschild, Anne-Christin
Baumbach, Joerg Ingo
Baumbach, Jan
2013An Integrative Clinical Database and Diagnostics Platform for Biomarker Identification and Analysis in Ion Mobility Spectra of Human Exhaled Air
In: Journal of Integrative Bioinformatics [10],
Electronic Journal ArticleHauschild2013d
1
Hide details for Schnoes, Alexandra MSchnoes, Alexandra M
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Schork, Andrew J.Schork, Andrew J.
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Schramm, ChristophSchramm, Christoph
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
2
Hide details for Schreiber, StefanSchreiber, Stefan
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
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In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Schrumpf, ErikSchrumpf, Erik
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
3
Hide details for Schulz, Marcel HolgerSchulz, Marcel Holger
Le, Hai-Son
Schulz, Marcel Holger
McCauley, Brenna MM
Hinman, Veronica F
Bar-Joseph, Ziv
2013Probabilistic error correction for RNA sequencing
In: Nucleic Acids Researcb [41], e109
Journal ArticleSchulzA2013
Schulz, Marcel Holger
Pandit, Kusum V
Lino Cardenas, Christian L
Ambalavanan,Namasivayam
Kaminski, Naftali
Bar-Joseph, Ziv
2013Reconstructing dynamic microRNA-regulated interaction networks
In: Proceedings of the National Academy of Sciences of the United States [110], 15686–15691
Journal ArticleSchulzB2013
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Schwienbacher, ChristineSchwienbacher, Christine
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Searle, SMSearle, SM
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Seemayer, StefanSeemayer, Stefan
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Serafin, AliceSerafin, Alice
Zanon, Alessandra
Rakovic, Aleksandar
Blankenburg, Hagen
Doncheva, Nadezhda T.
Schwienbacher, Christine
Serafin, Alice
Alexa, Adrian
Weichenberger, Christian X.
Albrecht, Mario
Klein, Christine
Hicks, Andrew A.
Pramstaller, Peter P.
Domingues, Francisco S.
Pichler, Irene
2013Profiling of parkin-binding partners using tandem affinity purification
In: PLoS ONE [8], 1-17
Journal ArticleAlbrecht2013c
1
Hide details for Shah, TejasShah, Tejas
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Shatkay, HagitShatkay, Hagit
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Sierra, S.Sierra, S.
Bozek, K.
Lengauer, Thomas
Sierra, S.
Kaiser, Rolf
Domingues, F.S.
Stop sign Icon2013Analysis of physicochemical and structural properties determining HIV-1 coreceptor usage
In: PLoS Computational Biology [x], x
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Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Simmer, F.Simmer, F.
Simmer, F.
Brinkmann, A.B.
Assenov, Yassen
Matarese, F.
Kaan, A.
Lengauer, Thomas
Bock, Christoph
Colantuoni, V.
Altucci, L.
Stunnenberg, H.G.
2013Comparative genome-wide DNA methylation analysis of colorectal tumor and matched human tissue
In: Epigenetics [7], 1355-1367
Journal Articlelengauer2013g
1
Hide details for Skieceviciene, JurgitaSkieceviciene, Jurgita
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Skunca, NivesSkunca, Nives
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Smuc, TomislavSmuc, Tomislav
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Sokolov, ArtemSokolov, Artem
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Solorzano, NDSolorzano, ND
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Solovyev, VSolovyev, V
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Sommer, IngolfSommer, Ingolf
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Souza, Michael LSouza, Michael L
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Srivastava, BrijeshSrivastava, Brijesh
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Stade, BjörnStade, Björn
Ellinghaus, David
Zhang, Hu
Zeissig, Sebastian
Lipinski, Simone
Till, Andreas
Jiang, Tao
Stade, Björn
Bromberg, Yana
Ellinghaus, Eva
Keller, Andreas
Rivas, Manuel A.
Skieceviciene, Jurgita
Doncheva, Nadezhda T.
Liu, Xiao
Liu, Qing
Jiang, Fuman
Forster, Michael
Mayr, Gabriele
Albrecht, Mario
Häsler, Robert
Boehm, Bernhard O.
Goodall, Jane
Berzuini, Carlo R.
Lee, James
Andersen, Vibeke
Vogel, Ulla
Kupcinskas, Limas
Kayser, Manfred
Krawczak, Michael
Nikolaus, Susanna
Weersma, Rinse K.
Ponsioen, Cyriel Y.
Sans, Miquel
Wijmenga, Cisca
Strachan, David P.
McArdle, Wendy L.
Vermeire, Séverine
Rutgeerts, Paul
Sanderson, Jeremy D.
Mathew, Christopher G.
Vatn, Morten H.
Wang, Jun
Nöthen, Markus M.
Duerr, Richard H.
Büning, Carsten
Brand, Stephan
Glas, Jürgen
Winkelmann, Juliane
Illig, Thomas
Latiano, Anna
Annese, Vito
Halfvarson, Jonas
D'Amato, Mauro
Daly, Mark J.
Nothnagel, Michael
Karlsen, Tom H.
Subramani, Suresh
Rosenstiel, Philip
Schreiber, Stefan
Parkes, Miles
Franke, Andre
2013Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
In: Gastroenterology [145], 339-347
Journal ArticleAlbrecht2013b
1
Hide details for Stanke, MStanke, M
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Steijger, TSteijger, T
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Sternberg, Michael J ESternberg, Michael J E
Radivojac, Predrag
Clark, Wyatt T
Oron, Tal Ronnen
Schnoes, Alexandra M
Wittkop, Tobias
Sokolov, Artem
Graim, Kiley
Funk, Christopher
Verspoor, Karin
Ben-Hur, Asa
Pandey, Gaurav
Yunes, Jeffrey M
Talwalkar, Ameet S
Repo, Susanna
Souza, Michael L
Piovesan, Damiano
Casadio, Rita
Wang, Zheng
Cheng, Jianlin
Fang, Hai
Gough, Julian
Koskinen, Patrik
T\"{o}r\"{o}nen, Petri
Nokso-Koivisto, Jussi
Holm, Liisa
Cozzetto, Domenico
Buchan, Daniel W A
Bryson, Kevin
Jones, David T
Limaye, Bhakti
Inamdar, Harshal
Datta, Avik
Manjari, Sunitha K
Joshi, Rajendra
Chitale, Meghana
Kihara, Daisuke
Lisewski, Andreas M
Erdin, Serkan
Venner, Eric
Lichtarge, Olivier
Rentzsch, Robert
Yang, Haixuan
Romero, Alfonso E
Bhat, Prajwal
Paccanaro, Alberto
Hamp, Tobias
Ka\ss ner, Rebecca
Seemayer, Stefan
Vicedo, Esmeralda
Schaefer, Christian
Achten, Dominik
Auer, Florian
Boehm, Ariane
Braun, Tatjana
Hecht, Maximilian
Heron, Mark
H\"{o}nigschmid, Peter
Hopf, Thomas A
Kaufmann, Stefanie
Kiening, Michael
Krompass, Denis
Landerer, Cedric
Mahlich, Yannick
Roos, Manfred
Bj\"{o}rne, Jari
Salakoski, Tapio
Wong, Andrew
Shatkay, Hagit
Gatzmann, Fanny
Sommer, Ingolf
Wass, Mark N
Sternberg, Michael J E
Skunca, Nives
Supek, Fran
Bo\v{s}njak, Matko
Panov, Pan\v{c}e
D\v{z}eroski, Sa\v{s}o
Smuc, Tomislav
Kourmpetis, Yiannis A I
van Dijk, Aalt D J
Braak, Cajo J F Ter
Zhou, Yuanpeng
Gong, Qingtian
Dong, Xinran
Tian, Weidong
Falda, Marco
Fontana, Paolo
Lavezzo, Enrico
{Di Camillo}, Barbara
Toppo, Stefano
Lan, Liang
Djuric, Nemanja
Guo, Yuhong
Vucetic, Slobodan
Bairoch, Amos
Linial, Michal
Babbitt, Patricia C
Brenner, Steven E
Orengo, Christine
Rost, Burkhard
Mooney, Sean D
Friedberg, Iddo
2013A large-scale evaluation of computational protein function prediction
In: Nature Methods [10], 221-227
Journal ArticleSommer2013
1
Hide details for Sterneck, MartinaSterneck, Martina
Liu, Jimmy Z.
Hov, Johannes Roksund
Folseraas, Trine
Ellinghaus, Eva
Rushbrook, Simon M.
Doncheva, Nadezhda T.
Andreassen, Ole A.
Weersma, Rinse K.
Weismuller, Tobias J.
Eksteen, Bertus
Invernizzi, Pietro
Hirschfield, Gideon M.
Gotthardt, Daniel Nils
Pares, Albert
Ellinghaus, David
Shah, Tejas
Juran, Brian D.
Milkiewicz, Piotr
Rust, Christian
Schramm, Christoph
Muller, Tobias
Srivastava, Brijesh
Dalekos, Georgios
Nothen, Markus M.
Herms, Stefan
Winkelmann, Juliane
Mitrovic, Mitja
Braun, Felix
Ponsioen, Cyriel Y.
Croucher, Peter J. P.
Sterneck, Martina
Teufel, Andreas
Mason, Andrew L.
Saarela, Janna
Leppa, Virpi
Dorfman, Ruslan
Alvaro, Domenico
Floreani, Annarosa
Onengut-Gumuscu, Suna
Rich, Stephen S.
Thompson, Wesley K.
Schork, Andrew J.
Naess, Sigrid
Thomsen, Ingo
Mayr, Gabriele
Konig, Inke R.
Hveem, Kristian
Cleynen, Isabelle
Gutierrez-Achury, Javier
Ricano-Ponce, Isis
van Heel, David
Bjornsson, Einar
Sandford, Richard N.
Durie, Peter R.
Melum, Espen
Vatn, Morten H.
Silverberg, Mark S.
Duerr, Richard H.
Padyukov, Leonid
Brand, Stephan
Sans, Miquel
Annese, Vito
Achkar, Jean-Paul
Boberg, Kirsten Muri
Marschall, Hanns-Ulrich
Chazouilleres, Olivier
Bowlus, Christopher L.
Wijmenga, Cisca
Schrumpf, Erik
Vermeire, Severine
Albrecht, Mario
The UK-PSCSC Consortium,
The International IBD Genetics Consortium,
Rioux, John D.
Alexander, Graeme
Bergquist, Annika
Cho, Judy
Schreiber, Stefan
Manns, Michael P.
Farkkila, Martti
Dale, Anders M.
Chapman, Roger W.
Lazaridis, Konstantinos N.
The International PSC Study Group,
Franke, Andre
Anderson, Carl A.
Karlsen, Tom H.
2013Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis
In: Nature Genetics [45], 670-677
Journal ArticleAlbrecht2013a
1
Hide details for Stevenson, BJStevenson, BJ
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu, J
Wu, TD
Zeller, G
Zerbino, D
Zhang, MQ
Hubbard, TJ
Guigó, R
Harrow, J
Bertone, P
2013Assessment of transcript reconstruction methods for RNA-seq
In: Nature Methods [10], 1177-84
Journal ArticleSchulzC2013
1
Hide details for Stockinger, HStockinger, H
Steijger, T
Abril, JF
Engström,PG
Kokocinski, F
Abril, JF
Akerman, M
Alioto, T
Ambrosini, G
Antonarakis, SE
Behr, J
Bohnert, R
Bucher, P
Cloonan, N
Derrien, T
Djebali, S
Du, J
Dudoit, S
Engström, PG
Gerstein, M
Gingeras, TR
Gonzalez, D
Grimmond, SM
Habegger, L
Iseli, C
Jean, G
Kahles, A
Kokocinski, F
Lagarde, J
Leng, J
Lefebvre, G
Lewis, S
Mortazavi, A
Niermann, P
Rätsch, G
Reymond, A
Ribeca, P
Richard, H
Rougemont, J
Rozowsky, J
Sammeth, M
Sboner, A
Schulz, Marcel Holger
Searle, SM
Solorzano, ND
Solovyev, V
Stanke, M
Steijger, T
Stevenson, BJ
Stockinger, H
Valsesia, A
Weese, D
White, S
Wold, BJ
Wu,