Max-Planck-Institut für Informatik
max planck institut
informatik
mpii logo Minerva of the Max Planck Society
 

MPI-INF D3 Publications

MPI-INF D3 Publications

Entries sorted by: 3. Type of Publication - 2. Only Thesis - 1. By Names

Login to this database


 

Previous Page | Next Page | Expand All | Collapse All | Search (Full Text)
Show entries starting with: A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

#Author/EditorMonthYearTitle
36
Hide details for Bachelor thesisBachelor thesis
Binsl, ThomasNov2004Completed IconAttachment IconImplementation of a Generic Fragment
Based Method for Automated
Calculation of the Octanol-Water
Partition Coefficient
Universität des Saarlandes
Djoumbou, YannickDec2005Stop sign IconDocking studies to investigate the effect of correlated mutations in the HIV-Protease on the drug resistance of HIV
Universität des Saarlandes
Döring, MatthiasSep2011Completed IconWeb Implementation of the HBV Dual Infection Model
Universität des Saarlandes
Dörr, BarbaraOct2010Completed IconUsing copy number variation fpr predicting susceptibility to glioblastoma
Universität des Saarlandes
Ebert, PeterOct2009Completed IconComputational Analysis of genomic HPV data
Universität des Saarlandes
Eyrisch, SusanneMar2004Completed IconAttachment IconFun2Struc-A Tool For Predicting Protein Structure
Classes from Function Predictions
Universität des Saarlandes
Frings, OliverJan2006Completed IconDevelopment of a
Smith-Waterman-Like Multi-Aspect
Alignment Tool
Universität des Saarlandes
Galata, ValentinaJun2012Completed IconApplying Lasso regression to related cell types for gene network astimation
Universität des Saarlandes
Gatzmann, FannySep2010Completed IconGOdot Sequence - function prediction from protein sequence
Universität des Saarlandes
Glaab, EnricoFeb2006Completed IconOn the predictability of CpG methylation in human tissue at single basepair resolution
Universität des Saarlandes
Hobler, AnnaJun2006Stop sign IconDocking of monosaccharids into the wild type and mutants of pyranose 2-oxidase
Universität des Saarlandes
Immesberger, StefanJan2005Completed IconAttachment IconA Prefiltering Method to Speed up Protein
Structure Prediction
Universität des Saarlandes
Junge, AlexanderSep2011Completed IconUnsupervised dissection of cancer types based on genomic, epigenomic and transciptomic features
Universität des Saarlandes
Jung, HolgerDec2006Completed IconYamada Analyzer - A tool for fast calculation of genomic attributes
Universität des Saarlandes
Kacprowski, TimMay2010Completed IconAnalysis of protein complexes and tissue-spedific expression
Universität des Saarlandes
Kaspar, MelanieJan2005Completed IconAttachment IconConformational Analysis of Macrocyclic Ring Systems
Universität des Saarlandes
Klingen, ThorstenMar2012Completed IconAutomatic Recombination Analysis Using Recoo and Mebitoo
Universität des Saarlandes
König, EvaJun2010Completed IconEnv-wide analysis of coreceptor determining sites and subtype-specific differences in HIV-1
Universität des Saarlandes
Krier, MarkusJun2005Completed IconAttachment IconMotif Search in Protein Sequences for Protein
Structure Prediction
Universität des Saarlandes
Mangels, MiriamFeb2009Completed IconIn Silico Models for the Prediction of Metabolism by Cytochrome P450 Enzymes
Universität des Saarlandes
Meiser, InaJul2005Stop sign IconIdentification of functionally important regions in cytochrome P450 systems and a systematic analysis of various CYP P450 homology models
Universität des Saarlandes
Müller, FabianFeb2008Completed IconInferring virological response to antiretroviral combination therapy based on past treatment lines
Universität des Saarlandes
Nickels, StefanSep2005Completed IconAttachment IconGenerating Molecular Hashcodes for
Finding Duplicates in Virtual Screening
Libraries
Universität des Saarlandes
Perner, JulianeNov2008Completed IconAttachment IconSemi-Supervised Learning for Predicting Anti-HIV Drug Resistance
Universität des Saarlandes
Pfeifer, SusanneSep2006Completed IconDevelopment of a fast
geometry-based screening
compound prefiltering technique
Universität des Saarlandes
Reimer, DanielaJun2006Stop sign IconDocking studies to investigate the effect of correlated mutations in the HIV-Protease on the drug resistance of HIV
Universität des Saarlandes
Reuter, KerstinSep2011Completed IconEstimating and Using the Uncertainty in the Phenotypic Resistance Assay of the Hepatitis B Virus to Improve IC-50 Prediction from Genotype
Universität des Saarlandes
Schlicker, AndreasSep2004Completed IconAttachment IconAutomated Differential Analysis of Proteomes
Universität des Saarlandes
Speicher, Nora K.Dec2010Completed IconNetwork analysis of viral host factors
Universität des Saarlandes
Stöckel, DanielNov2008Completed IconProtein Surface Remeshing and Characterisation Using Morse-Smale Complexes
Universität des Saarlandes
Volkamer, AndreaApr2005Completed IconAttachment IconImplementation of a method to filter
out compounds with toxic, reactive
and unsuitable functional groups
Universität des Saarlandes
Weimann, AaronMay2009Completed IconUsing multidimensional Scaling for visualizing similarities of proteins
Universität des Saarlandes
Weiss, JuliaJun2005Completed IconAttachment IconGenerating Frequency Profiles from Multiple
Structure Alignments
Universität des Saarlandes
Yalak, GarifFeb2005Completed IconAttachment IconAnalysis of Mutations in the Death Domains, Death Effector Domains, Caspase
Recruitment Domains, and Pyrin Domains
Universität des Saarlandes
Zeidler, MichaelSep2012Completed IconCloudbasierte Analyse von viralen Sequenzdaten der neuesten Generation
Universität des Saarlandes
Zimmer, TobiasJun2006Completed IconFunctional Site Scaffolds
Universität des Saarlandes
54
Hide details for Master's thesisMaster's thesis
Alexa, AdrianMar2005Completed IconIntegrating the GO graph structure in scoring the
significance of Gene Ontology terms
Universität des Saarlandes
Assenov, YassenNov2006Completed IconTopological Analysis of Biological
Networks
Universität des Saarlandes
Bader, MathiasOct2012Completed IconClustering epigenetic data using a Dirichlet process prior
Universität des Saarlandes
Bastys, TomasNov2012Completed IconAttachment IconMAP Kinase Docking Motifs in HIV Proteins
Universität des Saarlandes
Bayjanov, JumamuratOct2004Completed IconScoring pathway activity from gene
expression data
Universität des Saarlandes
Binsl, Thomas2006Completed IconFeature Prints: A new method for calculating molecular similarities
Universität des Saarlandes
Bogojeska, JasminaJan2007Completed IconStability analysis of oncogenetic trees mixture models
Universität des Saarlandes
Diehl, SarahJun2009Completed IconAnalysis and reconstruction of protein complex topology
Universität des Saarlandes
Dietzen, MatthiasAug2007Completed IconAn additive tree-based approach to the prediction of the strength of acidity for drug-like molecules
Universität des Saarlandes
Djoumbou, YannickDec2008Completed IconMolecular Dynamics based prediction of HIV-1 drug resistance
Universität des Saarlandes
Doncheva, Nadezhda, T.Jul2009Completed IconAnalysis and visualization of residue interaction networks
Universität des Saarlandes
Eldarov, NasimiSep2012Completed IconModeling influenza evolution in response to immune system pressure
Universität des Saarlandes
Feuerbach, LarsSep2007Completed IconAttachment IconTowards Comparative Epigenomics: A Pilot Study on DNA Methylation of CpG Islands on Human Chromosome 21
Universität des Saarlandes
Fischer, SandraMar2008Completed IconStructure-based prediction of HIV-1 drug resistance
Universität des Saarlandes
Guo, XinJun2006Completed IconImproving Fold Recognition Using Protein
and Domain Interactions
Universität des Saarlandes
Gwinner, FrederikFeb2009Completed IconAssessing the Conservation of Protein Function on Evolutionary Defined Patches
Universität des Saarlandes
Haid, CarlaSep2007Completed IconBSIFlex: Binding Site Identification including protein flexibility
Universität des Saarlandes
Halachev, KonstantinSep2006Completed IconEpiGRAPHregression: A toolkit for (epi-)genomic correlation analysis and prediction of quantitative attributes
Universität des Saarlandes
Hauschild, Anne-Christin2011Completed IconModeling HIV Neutralization
Universität des Saarlandes
Hoinka, Jan-MalteFeb2011Completed IconFinding the Hairpin in the Haystack: Towards an High Throughput in Silico Pipeline for Aptamer Motif Identification using SELEX Data
Universität des Saarlandes
Ifrim, GeorgianaMay2005Completed IconA Bayesian Learning Approach to Concept-Based Document Classification
Universität des Saarlandes
Ivanova, Violeta2011Completed IconComparison of methods for discovering genomic aberrations relevant for cancer
Universität des Saarlandes
Jing, Cui2011Completed IconA comprehensive analysis of the illumina Infinium assay
Universität des Saarlandes
Kacprowski, TimDec2011Completed IconDisease gene prioritization by combining network information and functional knowledge
Universität des Saarlandes
Kalaghatgi, PrabhavJun2012Completed IconA Phylodynamic Study of HIV Transmission Networks in Europe
Universität des Saarlandes
Kaspar, MelanieJul2006Completed IconAutomated conformational analysis of macrocyclic ring systems
Universität des Saarlandes
Kircher, MartinMay2007Completed IconIn silico analysis of microRNA genes on human chromosome 14 and mouse chromosome 12
Universität des Saarlandes
König, EvaJul2012Completed IconAutomatic detection of loss of heterozygosity in cancer
Universität des Saarlandes
Korbel, Ulli S.May2007Completed IconIdentification of Symmetries in Molecules and Complexes
Universität des Saarlandes
Koser, SandraMar2012Completed IconReconstructing anecestral methylation states in phylogenetic trees
Universität des Saarlandes
Kuhn Cuellar, Luis EugenioMay2010Completed IconA probabilistic algorithm for matching protein structures - and its application to detecting functionally relevant patterns
Universität des Saarlandes
Loi, Luu PhucAug2010Completed IconIdentifying discriminative motifs for molecular function of proteins
Universität des Saarlandes
Lutsik, PavloApr2010Completed IconProcessing of high-throughput DNA methylation data
Universität des Saarlandes
Müller, FabianJul2009Completed IconAssessing Antibody Neutralization of HIV-1 as an Initial Step in the Search for gp160-based Immunogens
Universität des Saarlandes
Müller, JoachimMay2012Completed IconExtracting pathways from biological networks incorporating omics data, introducing a webinterface for KeyPathwayMiner
Universität des Saarlandes
Müller, OliverSep2007Stop sign IconUsing Shape Retrieval Techniques for Identifying Similar Protein Binding Sites
Universität des Saarlandes
Perner, JulianeNov2010Completed IconFinding local similarities in gene expression patterns between partially reprogrammed cells and know cell types using a module network approach
Universität des Saarlandes
Pironti, AlejandroJul2009Completed IconProbabilistic disease gene prioritization
Universität des Saarlandes
Ramírez, Fidel2004Completed IconHacia una comprension de la accion de la recombinacion genetica y la mutacion en el origen de la variacion fenotipica, mediante el analisis de la computacion evolutiva
Universidad Nacional de Colombia
Schelhorn, Sven-EricJun2007Completed IconPrediction of Domain and Motif Interactions from Protein Networks
Universität des Saarlandes
Schlicker, AndreasAug2005Completed IconA Global Approach to Comparative Genomics: Comparison of Functional Annotation over the Taxonomic Tree
Universität des Saarlandes
Schüffler, PeterApr2008Completed IconMethMarker – A toolkit for design, optimization and validation of DNA methylation biomarkers for cancer diagnosis and therapy optimization
Universität des Saarlandes
Sing, TobiasApr2004Completed IconLearning localized rule mixtures by maximizing the area under the ROC curve, with an application to the prediction of HIV-1 coreceptor usage
Universität Freiburg
Siu, Shirley Weng-InSep2005Completed IconComputational prediction of MHC-peptide interactions
Universität des Saarlandes
Speicher, NoraDec2012Completed IconTowards the identification of cancer subtypes by integrative clustering of molecular data
Universität des Saarlandes
Stöckel, DanielApr2010Completed IconHistory Based HIV Therapy Outcome Prediction
Universität des Saarlandes
Thielen, AlexanderMar2006Completed IconPrediction of linear B-cell epitopes and MHC class II binding peptides
Eberhardt-Karls-Universität Tübingen
Tolosi, LauraJun2006Completed IconAnalysis of Array CGH Data for the Estimation of Genetic Tumor Progression
Universität des Saarlandes
Trajkovski, IgorSep2004Completed IconAnalysis of protein binding pocket flexibility
Universität des Saarlandes
Volkamer, AndreaAug2007Completed IconAutomated generation of pharmacophore type constraints to improve FlexX docking
Universität des Saarlandes
Weimann, Aaron2011Completed IconFunctional Profiling in Metagenomics
Universität des Saarlandes
Weinhold, NilsDec2006Completed IconInference of Protein Function based on Functionally Conserved Regions in Sequence and Structure Space
Universität des Saarlandes
Weisser, HendrikSep2007Stop sign IconEstimating the local variance of protein structure models
Universität des Saarlandes
Yin, JunmingMar2005Completed IconModel Selection for Mixtures of Mutagenetic Trees
Universität des Saarlandes
21
Hide details for Doctoral dissertationDoctoral dissertation
Albrecht, MarioFeb2006Completed IconCombining protein structure prediction with experiments and functional information
Universität des Saarlandes
Altmann, AndréMar2010Completed IconBioinformatical approaches to ranking of anti-HIV combination therapies and planning of treatment schedules
Universität des Saarlandes
Beerenwinkel, NikoDec2003Completed IconAttachment IconComputational Analysis of HIV Drug Resistance Data
Universität des Saarlandes
Bock, ChristophOct2008Completed IconComputational Epigenetics - Bioinformatic methods for epigenome prediction, DNA methylation mapping and cancer epigenetics
Universität des Saarlandes
Bogojeska, JasminaDec2011Completed IconAttachment IconStatistical Learning Methods for Bias-aware HIV Therapy Screening
Universität des Saarlandes
Bozek, KatarzynaDec2011Completed IconAttachment IconAnalysis of HIV-host interaction on different scales.
Universität des Saarlandes
Emig, DorotheaFeb2011Completed IconNovel analysis approaches to context-dependent molecular networks
Universität des Saarlandes
Hartmann, ChristophJul2008Completed IconModeling of Flexible Side Chains for Protein-Ligand Docking
Universität des Saarlandes
Johannsen, DanielApr2010Completed IconRandom Combinatorial Structures and Randomized Search Heuristics
Universität des Saarlandes
Kunert, Lars2011Completed IconMaximal Common Subgraph DAGs: Theory and Application to Virtual Screening in Drug Development
Universität des Saarlandes
Maydt, JochenDec2008Completed IconAnalysis of recombination in Molecular Sequence Data
Universität des Saarlandes
Patil, Kaustubh RaosahebJan2013Completed IconGenome Signature based Sequence Comparison for Taxonomic Assignment and tree inference
Universität des Saarlandes
Ramirez, FidelApr2012Completed IconNovel Approaches to the Integration and Analysis of Systems Biology
Universität des Saarlandes
Sander, OliverDec2008Completed IconStructural Descriptors for the Analysis of Protein Structure, Function, and Evolution
Universität des Saarlandes
Schlicker, AndreasNov2010Completed IconAttachment IconOntology-based Similarity Measures and their Application in Bioinformatics
Universität des Saarlandes
Sing, TobiasApr2008Completed IconModel-Based Anti HIV Therapy
Universität des Saarlandes
Steffen, AndreasJan2008Completed IconComputational Approaches in Supramolecular Chemistry with a special Focus on Virtual Screening
Universität des Saarlandes
Talwar, PritiNov2008Completed IconDevelopment of Computational Methods for Metabolic Network Analysis based on Metabolomics Data
Universität des Saarlandes
Thielen, AlexanderJun2011Completed IconGenotypic Analysis of HIV-1 Coreceptor Usage
Universität des Saarlandes
Tolosi, LauraSep2012Completed IconFinding Regions of Aberrant DNA Copy Number Associated With Tumor Phenotype
Universität des Saarlandes
Zhu, HongboJun2010Completed IconCharacterization, classification and alignment of protein-protein interfaces
Universität des Saarlandes
3
Hide details for Habilitation thesisHabilitation thesis
Antes, IrisFeb2009Completed IconComputational Methods for the Investigation of Protein-Ligand Interactions
Universität des Saarlandes
Rahnenführer, JörgOct2006Completed IconStatistical methods for the biological interpretation of genome-wide measurements
Universität des Saarlandes
Sommer, IngolfSep2009Completed IconAttachment IconFrom Protein Structure to Function
Universität des Saarlandes
4
Hide details for Diploma thesisDiploma thesis
Blankenburg, HagenMar2007Stop sign IconA Distributed Annotation System for Molecular Interactions
Ruprecht Karl Universität Heidelberg; Universität Heilbronn
Emig, DorotheaMar2007Stop sign IconThe Impact of Alternative Splicing on Protein Interaction Networks
Eberhard Karls Universität Tübingen
Huthmacher, CarolaMay2006Completed IconDecomposing Protein Networks Into
Domain-Domain Interactions
Eberhard Karls University Tübingen
Sander, OliverJan2004Completed IconLocal sequence-structure relationships in proteins
Friedrich-Alexander-Universität Erlangen-Nürnberg
118

Previous Page | Next Page | Expand All | Collapse All | Search (Full Text)