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MPI-INF D3 Publications, generated: 6:33, 19 October 2019

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Your search returned the following 20 documents:

  1. Predrag Radivojac, Wyatt T Clark, Tal Ronnen Oron, Alexandra M Schnoes, Tobias Wittkop, Artem Sokolov, Kiley Graim, Christopher Funk, Karin Verspoor, Asa Ben-Hur, Gaurav Pandey, Jeffrey M Yunes, Ameet S Talwalkar, Susanna Repo, Michael L Souza, Damiano Piovesan, Rita Casadio, Zheng Wang, Jianlin Cheng, Hai Fang, Julian Gough, Patrik Koskinen, Petri T\"{o}r\"{o}nen, Jussi Nokso-Koivisto, Liisa Holm, Domenico Cozzetto, Daniel W A Buchan, Kevin Bryson, David T Jones, Bhakti Limaye, Harshal Inamdar, Avik Datta, Sunitha K Manjari, Rajendra Joshi, Meghana Chitale, Daisuke Kihara, Andreas M Lisewski, Serkan Erdin, Eric Venner, Olivier Lichtarge, Robert Rentzsch, Haixuan Yang, Alfonso E Romero, Prajwal Bhat, Alberto Paccanaro, Tobias Hamp, Rebecca Ka\ss ner, Stefan Seemayer, Esmeralda Vicedo, Christian Schaefer, Dominik Achten, Florian Auer, Ariane Boehm, Tatjana Braun, Maximilian Hecht, Mark Heron, Peter H\"{o}nigschmid, Thomas A Hopf, Stefanie Kaufmann, Michael Kiening, Denis Krompass, Cedric Landerer, Yannick Mahlich, Manfred Roos, Jari Bj\"{o}rne, Tapio Salakoski, Andrew Wong, Hagit Shatkay, Fanny Gatzmann, Ingolf Sommer, Mark N Wass, Michael J E Sternberg, Nives Skunca, Fran Supek, Matko Bo\v{s}njak, Pan\v{c}e Panov, Sa\v{s}o D\v{z}eroski, Tomislav Smuc, Yiannis A I Kourmpetis, Aalt D J van Dijk, Cajo J F Ter Braak, Yuanpeng Zhou, Qingtian Gong, Xinran Dong, Weidong Tian, Marco Falda, Paolo Fontana, Enrico Lavezzo, Barbara {Di Camillo}, Stefano Toppo, Liang Lan, Nemanja Djuric, Yuhong Guo, Slobodan Vucetic, Amos Bairoch, Michal Linial, Patricia C Babbitt, Steven E Brenner, Christine Orengo, Burkhard Rost, Sean D Mooney, and Iddo Friedberg
    A large-scale evaluation of computational protein function prediction
    Nature Methods 10 (3): 221-227, 2013
  2. Ingolf Sommer
    From Protein Structure to Function
    Habilitation thesis, Universität des Saarlandes, 2009

  3. Hongbo Zhu, Ingolf Sommer, Thomas Lengauer, and Francisco S. Domingues
    Alignment of Non-Covalent Interactions at Protein-Protein Interfaces
    PLoS ONE 3 (4): e1926 p., 2008
    [PDF: Download: Zhu2008.pdf]
  4. Nils Weinhold, Oliver Sander, Francisco S. Domingues, Thomas Lengauer, and Ingolf Sommer
    Local function conservation in sequence and structure space
    PLoS Computational Biology 4: e1000105 p., 2008
    [PDF: Download: Weinhold2008.pdf]
  5. Oliver Sander, Francisco S. Domingues, Hongbo Zhu, Thomas Lengauer, and Ingolf Sommer
    Structural descriptors of protein-protein binding sites
    In: Proceedings of 6th Asia-Pacific Bioinformatics Conference, Kyoto, Japan, 2008, 79-88
  6. James D. Watson, Janet M. Thornton, Michael L. Tress, Gonzalo Lopez, Alfonso Valencia, Oliver Redfern, Christine A. Orengo, Ingolf Sommer, and Francisco S. Domingues
    Structure to function
    In: Modern Genome Annotation, 2008, 239-262
  7. Ingolf Sommer, Oliver Müller, Francisco S. Domingues, Oliver Sander, Joachim Weickert, and Thomas Lengauer
    Moment invariants as shape recognition technique for comparing protein binding sites
    Bioinformatics 23 (23): 3139-3146, 2007
  8. Ingolf Sommer
    Protein Fold Recognition Based on Distant Homologs
    In: Bioinformatics - From Genomes to Therapies 1. The Building Blocks: Molecular Sequences and Structures, 2007, 351-388
  9. Oliver Sander, Tobias Sing, Ingolf Sommer, Andrew J. Low, Peter K. Cheung, P. Richard Harrigan, Thomas Lengauer, and Francisco S. Domingues
    Structural Descriptors of gp120 V3 Loop for the Prediction of HIV-1 Coreceptor Usage
    PLoS Computational Biology 3 (3): 555-564, 2007
    [PDF: Download: Sander.pdf]
  10. Thomas Lengauer, F.S. Domingues, Ingolf Sommer, and Hongbo Zhu
    Analysis and prediction of protein-protein-interaction types
    BMC Bioinformatics 7 (1), 2006
  11. Ingolf Sommer, Stefano Toppo, Oliver Sander, Thomas Lengauer, and Silvio C. E. Tosatto
    Improving the quality of protein structure models by selecting from alignment alternatives
    BMC Bioinformatics 7: 1-11, 2006
  12. Oliver Sander, Ingolf Sommer, and Thomas Lengauer
    Local protein structure prediction using discriminative models
    BMC Bioinformatics 7 (14): 1-13, 2006
  13. Hongbo Zhu, Francisco S. Domingues, Ingolf Sommer, and Thomas Lengauer
    NOXclass: prediction of protein-protein interaction types
    BMC Bioinformatics 7 (27): 1-15, 2006
  14. Hongbo Zhu, Francisco S. Domingues, Ingolf Sommer, and Thomas Lengauer
    Analysis and prediction of protein-protein interaction types
    In: 4th European Conference on Computational Biology (ECCB05), Madrid, Spain, 2005, 1 p.
  15. Niklas Öhsen von, Ingolf Sommer, Ralf Zimmer, and Thomas Lengauer
    Arby: Automatic protein structure prediction using profile-profile alignment and confidence measures
    Bioinformatics 20 (14): 2228-2235, 2004
  16. Ingolf Sommer, Jörg Rahnenführer, Francisco S. Domingues, Ulrik de Lichtenberg, and Thomas Lengauer
    Predicting Protein Structure Classes from Function Predictions
    Bioinformatics 20 (5): 770-776, 2004
  17. Francisco S. Domingues, Thomas Lengauer, and Ingolf Sommer
    Protein Structure Prediction and Databases
    In: Nature Encyclopedia of the Human Genome, 2004, 864-867
  18. T. Crass, Iris Antes, R. Basekow, P. Bork, Christian Buning, M. Christensen, H. Claußen, C. Ebeling, P. Ernst, V. Gailus-Durner, K.-H. Glatting, R. Gohla, F. Gößling, K. Grote, K. Heidtke, A. Herrmann, S. O Keefe, O. Kießlich, S. Kolibal, J.O. Korbel, Thomas Lengauer, I. Liebich, M. van der Linden, H. Luz, K. Meissner, C. von Mering, T. Mevissen, H.-W. Mewes, H. Michael, M. Mokrejs, T. Müller, H. Pospisil, Matthias Rarey, J.G. Reich, R. Schneider, D. Schomburg, S. Schulze-Kremer, K. Schwarzer, Ingolf Sommer, S. Springstubbe, S. Suhai, G. Thoppae, M. Vingron, J. Warfsmann, T. Werner, D. Wetzler, E. Wingender, and Ralf Zimmer
    The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources
    Bioinformatics 20: 268-270, 2004
  19. Ingolf Sommer, Alexander Zien, Niklas Öhsen von, Ralf Zimmer, and Thomas Lengauer
    Confidence measures for protein fold recognition
    Bioinformatics 18 (6): 802-812, 2002
  20. Niklas von Öhsen, Ingolf Sommer, and Ralf Zimmer
    Profile-Profile Alignment: A Powerful Tool For Protein Structure Prediction
    In: Pacific Symposium on Biocomputing, PSB 2003, Hawaii, USA, January 2003, 2003, 252-263