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What and Who
Title:Detecting patterns in functionally annotated protein structures
Speaker:Luis Kuhn Cuellar
coming from:International Max Planck Research School for Computer Science - IMPRS-CS
Speakers Bio:
Event Type:Masterseminar
Visibility:D1, D3, D4, D5, SWS, RG1, MMCI
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Level:AG Audience
Language:English
Date, Time and Location
Date:Wednesday, 29 July 2009
Time:13:05
Duration:60 Minutes
Location:Saarbr├╝cken
Building:E1 4
Room:024
Abstract
The 3D structure of a protein is intimately related to it's function.
Since most protein structures are functionally annotated, finding
structural patterns in a set of proteins structures that share the
same molecular function annotation is now feasible, and relevant to
gain insight on molecular function.
The objective of this work is to detect patterns in the 3D structures
of proteins that are annotated with the same protein function. The
focus of the work will be on developing a randomized algorithm capable
of finding known structural patterns. The method will be validated on
sets of functionally annotated proteins. This work aims to provide a
useful algorithm for creating libraries of patterns indicative of
particular molecular functions.
Contact
Name(s):imprs
Phone:225
EMail:--email address not disclosed on the web
Video Broadcast
Video Broadcast:NoTo Location:
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Attachments, File(s):
  • Jennifer Gerling, 07/20/2009 05:40 PM -- Created document.